RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SLC44A3Q8N4M1 653 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 DDHD1Q8NEL9 900 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 TNIP2Q8NFZ5 429 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 PIK3R3Q92569 461 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 ZNF514Q96K75 400 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-203ENST00000378037 ZNF583Q96ND8 569 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 FEVQ99581 238 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 REEP4Q9H6H4 257 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 ABCB9Q9NP78 766 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 CNIH4Q9P003 139 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 H2AFY2Q9P0M6 372 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-203ENST00000378037 IFT80Q9P2H3 777 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-203ENST00000378037 ZFR2Q9UPR6 939 aaKnown RBP7.72□□□□□ -1.17
CKAP2-203ENST00000378037 MRPS7Q9Y2R9 242 aaKnown RBP7.72□□□□□ -1.17
CKAP2-203ENST00000378037 ATG4BQ9Y4P1 393 aa7.72□□□□□ -1.17
CKAP2-203ENST00000378037 LOC105369274A0A096LPK9 316 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 LOC102723532A0A0G2JNH3 316 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 LATS1O95835 1130 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 IFNW1P05000 195 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 HMGN2P05204 90 aaKnown RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 ENO2P09104 434 aaPredicted RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 CISD3P0C7P0 127 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 CCNYL3P0C7X3 344 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 FCGR1AP12314 374 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 ZNF182P17025 639 aaPredicted RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 RPL4P36578 427 aaKnown RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 PIK3CBP42338 1070 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 RANBP1P43487 201 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 TOP3AQ13472 1001 aaPredicted RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 VMACQ2NL98 169 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 PIP5KL1Q5T9C9 394 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 PGM2L1Q6PCE3 622 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 PLEKHM3Q6ZWE6 761 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 EIF3MQ7L2H7 374 aaKnown RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 R3HCC1LQ7Z5L2 792 aaKnown RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 GPR135Q8IZ08 494 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 OR4N4Q8N0Y3 316 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 COX18Q8N8Q8 333 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 UBE2E3Q969T4 207 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 ISL2Q96A47 359 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 RGMAQ96B86 450 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 TMEM19Q96HH6 336 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 CEP295NLQ96MC4 621 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 CTRCQ99895 268 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 SLC2A11Q9BYW1 496 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 POPDC3Q9HBV1 291 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 BRD7Q9NPI1 651 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 BATF3Q9NR55 127 aa7.71□□□□□ -1.17
CKAP2-203ENST00000378037 SPATA6Q9NWH7 488 aaPredicted RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 CHCHD3Q9NX63 227 aaKnown RBP7.71□□□□□ -1.17
CKAP2-203ENST00000378037 IGHV3-20A0A0C4DH32 117 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 TMPRSS11DO60235 418 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 WFS1O76024 890 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 CDH2P19022 906 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 PTX3P26022 381 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 PRDX6P30041 224 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 GRPRP30550 384 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ACADVLP49748 655 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 CLDN8P56748 225 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 SRP54P61011 504 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 MTAPQ13126 283 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 SLC14A2Q15849 920 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 HMBOX1Q6NT76 420 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ZNF605Q86T29 641 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ZZZ3Q8IYH5 903 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 RNF168Q8IYW5 571 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 CAMKK1Q8N5S9 505 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 DEFB123Q8N688 67 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ENDOVQ8N8Q3 282 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 OR10G2Q8NGC3 310 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 SETD7Q8WTS6 366 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ISG20Q96AZ6 181 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 MCCC1Q96RQ3 725 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 OSBPL11Q9BXB4 747 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 CXorf21Q9HAI6 301 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 CLK4Q9HAZ1 481 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 DMRT3Q9NQL9 472 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 TAS2R9Q9NYW1 312 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 TMEM181Q9P2C4 612 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 THAP10Q9P2Z0 257 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ATP6V1HQ9UI12 483 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 LRRC42Q9Y546 428 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 A0A1B0GVG6 124 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 YY2O15391 372 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 UGT2B17O75795 530 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 CLPXO76031 633 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 MRPL3P09001 348 aaKnown RBP7.71□□□□□ -1.18
CKAP2-203ENST00000378037 AHCYP23526 432 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 HRH2P25021 359 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 PIGAP37287 484 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 GPR4P46093 362 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ASMTP46597 345 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 PSMD7P51665 324 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 TAS2R38P59533 333 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 SNTA1Q13424 505 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 NKG7Q16617 165 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 OR2T5Q6IEZ7 315 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms