RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TBX5Q99593 518 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 YTHDF1Q9BYJ9 559 aaKnown RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CUEDC1Q9NWM3 386 aaPredicted RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 FAM53CQ9NYF3 392 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 RIMKLBQ9ULI2 386 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 RNH1P13489 461 aaKnown RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF20P17024 532 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ACSL1P33121 698 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 ID2Q02363 134 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 TSTQ16762 297 aaKnown RBP10.39□□□□□ -0.75
HIF3A-205ENST00000377670 GPAT4Q86UL3 456 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 CILP2Q8IUL8 1156 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 LRRC58Q96CX6 371 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 MS4A12Q9NXJ0 267 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 RDH8Q9NYR8 311 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 EPHA6Q9UF33 1036 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 MKLN1Q9UL63 735 aa10.39□□□□□ -0.75
HIF3A-205ENST00000377670 MYOCOSA0A1B0GUC4 107 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 KLK1P06870 262 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 SLC6A4P31645 630 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 PPP1R8Q12972 351 aaKnown RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CHAF1BQ13112 559 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TMEM53Q6P2H8 277 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ENDOVQ8N8Q3 282 aaKnown RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 DNAAF1Q8NEP3 725 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CNDP2Q96KP4 475 aaKnown RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 KCTD7Q96MP8 289 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 MTG2Q9H4K7 406 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 BRF2Q9HAW0 419 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CENPMQ9NSP4 180 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 GJD2Q9UKL4 321 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 LOC100130705A0A1B0GUX0 176 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 MAFKO60675 156 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 MAGEA12P43365 314 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TARDBPQ13148 414 aaKnown RBP eCLIP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF311Q5JNZ3 666 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TMEM236Q5W0B7 351 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CCDC28AQ8IWP9 274 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 PHTF2Q8N3S3 785 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 OR9I1Q8NGQ6 314 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 SH3YL1Q96HL8 342 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 NAA11Q9BSU3 229 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 OXSMQ9NWU1 459 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 SCO2O43819 266 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CD46P15529 392 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF182P17025 639 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 SLC9A3P48764 834 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 FNTBP49356 437 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 EFR3AQ14156 821 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 MEP1AQ16819 746 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 C4orf46Q504U0 113 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TMIGD1Q6UXZ0 262 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 UBE2Q1Q7Z7E8 422 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 OR10G2Q8NGC3 310 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 MRGPRX2Q96LB1 330 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 C1orf21Q9H246 121 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TMEM9BQ9NQ34 198 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 IFT46Q9NQC8 304 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 C1orf109Q9NX04 203 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 POFUT2Q9Y2G5 429 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 HSPB11Q9Y547 144 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 EVPLQ92817 2033 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 FXYD6-FXYD2A0A087WZ82 144 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 KCNJ13O60928 360 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 PAPSS2O95340 614 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 S100A2P29034 98 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 AGTR2P50052 363 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CBLBQ13191 982 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TUBB3Q13509 450 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 NSDHLQ15738 373 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 KLHL22Q53GT1 634 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TNFAIP8L2Q6P589 184 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 LRRC70Q7Z2Q7 622 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 APCDD1Q8J025 514 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ASB12Q8WXK4 309 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 AKAP1Q92667 903 aaKnown RBP eCLIP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 FXYD6Q9H0Q3 95 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 OR51V1Q9H2C8 321 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 THUMPD1Q9NXG2 353 aaKnown RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 PGAP2Q9UHJ9 254 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 RPL36Q9Y3U8 105 aaKnown RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ADAM12O43184 909 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 XPNPEP2O43895 674 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 DFNA5O60443 496 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 OAZ2O95190 189 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CSNK1EP49674 416 aaKnown RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ACADVLP49748 655 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 CDKL1Q00532 357 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 C3orf38Q5JPI3 329 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TOR1AIP2Q8NFQ8 470 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 NLGN4YQ8NFZ3 816 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-205ENST00000377670 SYT11Q9BT88 431 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 IFT27Q9BW83 186 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TRIM2Q9C040 744 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 COMMD4Q9H0A8 199 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
HIF3A-205ENST00000377670 ASB6Q9NWX5 421 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms