RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 HNRNPFP52597 415 aaKnown RBP20.65■□□□□ 0.9
SRM-201ENST00000376957 TNFRSF17Q02223 184 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 TUBA3CQ13748 450 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 NR6A1Q15406 480 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 SGO1Q5FBB7 561 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 TUBA3EQ6PEY2 450 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 RNF175Q8N4F7 328 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 TMEM52Q8NDY8 209 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 NFAM1Q8NET5 270 aaPredicted RBP20.65■□□□□ 0.9
SRM-201ENST00000376957 DNAJB8Q8NHS0 232 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 GRHL3Q8TE85 626 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 TMEM125Q96AQ2 219 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 DGAT2Q96PD7 388 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 OLAHQ9NV23 265 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 ADAM29Q9UKF5 820 aa20.65■□□□□ 0.9
SRM-201ENST00000376957 PPIEQ9UNP9 301 aaKnown RBP20.65■□□□□ 0.9
SRM-201ENST00000376957 A0A1W2PPM1 405 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 ANKUB1A6NFN9 424 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 LDB3O75112 727 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 KRT4P19013 534 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 HMOX2P30519 316 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 PKNOX1P55347 436 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 VSNL1P62760 191 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 PLIN5Q00G26 463 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 UBAP2LQ14157 1087 aaKnown RBP20.64■□□□□ 0.89
SRM-201ENST00000376957 OR1C1Q15619 314 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 ZNF766Q5HY98 468 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 CFAP157Q5JU67 520 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 GPRIN3Q6ZVF9 776 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 KIF2BQ8N4N8 673 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 PRR7Q8TB68 274 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 RDH11Q8TC12 318 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 MZB1Q8WU39 189 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 L3HYPDHQ96EM0 354 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 ART5Q96L15 291 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 ZNF382Q96SR6 550 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 BARD1Q99728 777 aaKnown RBP20.64■□□□□ 0.89
SRM-201ENST00000376957 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.64■□□□□ 0.891e-7■■□□□ 14.3
SRM-201ENST00000376957 LRFN1Q9P244 771 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 SLC12A4Q9UP95 1085 aa20.64■□□□□ 0.89
SRM-201ENST00000376957 C17orf105B2RV13 164 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 PROM1O43490 865 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 ULK1O75385 1050 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 ENO1P06733 434 aaKnown RBP20.63■□□□□ 0.89
SRM-201ENST00000376957 TUBBP07437 444 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 NR2F6P10588 404 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 HSD3B1P14060 373 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 EDN3P14138 238 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 HSD3B2P26439 372 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 CRHR1P34998 444 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 BSGP35613 385 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 CD96P40200 585 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 MLF1P58340 268 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 LCP2Q13094 533 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 CCNYL2Q5T2Q4 361 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 HSDL2Q6YN16 418 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 HOMEZQ8IX15 550 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 TMEM156Q8N614 296 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 APCDD1LQ8NCL9 501 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 ST6GALNAC3Q8NDV1 305 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 OR5L2Q8NGL0 311 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 METTL6Q8TCB7 284 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 EPS8L3Q8TE67 593 aaKnown RBP20.63■□□□□ 0.89
SRM-201ENST00000376957 NCLNQ969V3 563 aa20.63■□□□□ 0.89
SRM-201ENST00000376957 SORBS1Q9BX66 1292 aaKnown RBP20.63■□□□□ 0.89
SRM-201ENST00000376957 ROPN1BQ9BZX4 212 aaPredicted RBP20.63■□□□□ 0.89
SRM-201ENST00000376957 ROPN1Q9HAT0 212 aaPredicted RBP20.63■□□□□ 0.89
SRM-201ENST00000376957 A0A0A6YYD5 115 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 OR4F21O95013 312 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 AGFG2O95081 481 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 ZIC2O95409 532 aaPredicted RBP20.62■□□□□ 0.89
SRM-201ENST00000376957 CBX6O95503 412 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 NUDT17P0C025 328 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 TSPAN8P19075 237 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 ASPHQ12797 758 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 UNC50Q53HI1 259 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 LETMD1Q6P1Q0 360 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 CCNYL1Q8N7R7 359 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 CDYL2Q8N8U2 506 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 TMEM237Q96Q45 408 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 OR8D2Q9GZM6 311 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 ANKRD10Q9NXR5 420 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 YARS2Q9Y2Z4 477 aaKnown RBP20.62■□□□□ 0.89
SRM-201ENST00000376957 ATG4BQ9Y4P1 393 aa20.62■□□□□ 0.89
SRM-201ENST00000376957 OR10H2O60403 315 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 PDYNP01213 254 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 KLK1P06870 262 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 TPP2P29144 1249 aaPredicted RBP20.61■□□□□ 0.89
SRM-201ENST00000376957 STT3AP46977 705 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 UQCRFS1P47985 274 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 MAPK12P53778 367 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 FOLH1Q04609 750 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 CSTF3Q12996 717 aaKnown RBP20.61■□□□□ 0.89
SRM-201ENST00000376957 OR52E8Q6IFG1 317 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 ZYG11AQ6WRX3 759 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 RPS27LQ71UM5 84 aaKnown RBP20.61■□□□□ 0.89
SRM-201ENST00000376957 ARMC10Q8N2F6 343 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 GBP7Q8N8V2 638 aaPredicted RBP20.61■□□□□ 0.89
SRM-201ENST00000376957 OR8K3Q8NH51 312 aa20.61■□□□□ 0.89
SRM-201ENST00000376957 VPS29Q9UBQ0 182 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms