RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
ACTN1-202ENST00000376839 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-202ENST00000376839 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
ACTN1-202ENST00000376839 A0A075B6Q4 140 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 ARRDC5A6NEK1 342 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 SLITRK5O94991 958 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 TAP2Q03519 686 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF658BQ4V348 819 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 REEP3Q6NUK4 255 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 VN1R5Q7Z5H4 357 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 LAX1Q8IWV1 398 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 CELF5Q8N6W0 485 aaKnown RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 OR6F1Q8NGZ6 308 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 SLC38A5Q8WUX1 472 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 UCK2Q9BZX2 261 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 LINC00597Q9H2U6 94 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 FZD3Q9NPG1 666 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 ENOPH1Q9UHY7 261 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 V9GYH0 126 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 HBQ1P09105 142 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 PIPP12273 146 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 TYRP14679 529 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 POLR2EP19388 210 aaKnown RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 CD72P21854 359 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 HTR3AP46098 478 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 SLC5A11Q8WWX8 675 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 RAB8BQ92930 207 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 TP53INP1Q96A56 240 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 MOV10Q9HCE1 1003 aaKnown RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 MIEF1Q9NQG6 463 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 SNTG1Q9NSN8 517 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 HCFC1R1Q9NWW0 138 aa12.59□□□□□ -0.39
ACTN1-202ENST00000376839 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 WBP11Q9Y2W2 641 aaKnown RBP12.59□□□□□ -0.39
ACTN1-202ENST00000376839 LINC00854A0A1B0GVQ3 168 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 FAM47E-STBD1D6RA91 191 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ALDH1A1P00352 501 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ADAP00813 363 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 LRG1P02750 347 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ELFN1P0C7U0 828 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 OSMP13725 252 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 RPL3P39023 403 aaKnown RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 CRYBB2P43320 205 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 RFX2P48378 723 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 RHAGQ02094 409 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 SPHARQ15513 63 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF79Q15937 498 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 BAK1Q16611 211 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 TCTN3Q6NUS6 607 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 NXPE4Q6UWF7 544 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 LIPIQ6XZB0 460 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 VN1R2Q8NFZ6 395 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 OR4D11Q8NGI4 311 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 PDXPQ96GD0 296 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 IL17FQ96PD4 163 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 NRTNQ99748 197 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 PCDH10Q9P2E7 1040 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 NFKBIL1Q9UBC1 381 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 TRAPPC4Q9Y296 219 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 SNX11Q9Y5W9 270 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 A8MV72 311 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 H3BN98 237 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 K7ESM1 405 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 RTCAO00442 366 aaKnown RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 OR10H3O60404 316 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 UQCRC2P22695 453 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ELAVL4P26378 380 aaKnown RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 TIE1P35590 1138 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF91Q05481 1191 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 HIST2H2AA3Q6FI13 130 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 ERAP2Q6P179 960 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 LRRC56Q8IYG6 542 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-202ENST00000376839 UBQLNLQ8IYU4 475 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 FLCNQ8NFG4 579 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 KLHL6Q8WZ60 621 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 MRGPRX3Q96LB0 322 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 NLNQ9BYT8 704 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 TPK1Q9H3S4 243 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 C3orf14Q9HBI5 128 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 C5AR2Q9P296 337 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 N6AMT1Q9Y5N5 214 aa12.58□□□□□ -0.4
ACTN1-202ENST00000376839 B4GALT2O60909 372 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 KRT8P05787 483 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 WEE1P30291 646 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 IRS1P35568 1242 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 MMP12P39900 470 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 METAP1P53582 386 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 SNRPGP62308 76 aaKnown RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 GPR50Q13585 617 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 SLX4IPQ5VYV7 408 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 DEF8Q6ZN54 512 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms