RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 BCL6P41182 706 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 GSSP48637 474 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 PPP2CBP62714 309 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 PPP2CAP67775 309 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 EMX1Q04741 257 aaPredicted RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 TP53BP2Q13625 1128 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 RPE65Q16518 533 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 SMN1Q16637 294 aaKnown RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 EXOC3L2Q2M3D2 409 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 PROX2Q3B8N5 592 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 RPS26P11Q5JNZ5 115 aaPredicted RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 SZRD1Q7Z422 152 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 C6orf120Q7Z4R8 191 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 LGI4Q8N135 537 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 SLC38A5Q8WUX1 472 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 HRASLS5Q96KN8 279 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 PIP5K1AQ99755 562 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 DPH7Q9BTV6 452 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 FBRSQ9HAH7 460 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 PREBQ9HCU5 417 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 ERVK-18Q9QC07 812 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 A0A0A6YYD5 115 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 A0A1W2PQF6 199 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 PRR19A6NJB7 356 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 FAM20BO75063 409 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 INMTO95050 263 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 ANXA8P13928 327 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 FRKP42685 505 aaPredicted RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 SLC35A2P78381 396 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 TCEA2Q15560 299 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 NPTX1Q15818 432 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 MICAQ29983 383 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 TMEM35AQ53FP2 167 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 NDUFAF5Q5TEU4 345 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 LAIR1Q6GTX8 287 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 CCDC71Q8IV32 467 aaPredicted RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 TMEM145Q8NBT3 493 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 OR4C15Q8NGM1 316 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 ZNF764Q96H86 408 aaPredicted RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 MACROD1Q9BQ69 325 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 A4GALTQ9NPC4 353 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 SIRT3Q9NTG7 399 aaPredicted RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 SNX11Q9Y5W9 270 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 SNRNP200O75643 2136 aaKnown RBP19.2■□□□□ 0.66
VSX1-202ENST00000376709 PRSS38A1L453 326 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 TRIM64BA6NI03 449 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 IFNW1P05000 195 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 XCR1P46094 333 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 ENTPD1P49961 510 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 TRA2BP62995 288 aaKnown RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 NFATC3Q12968 1075 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 GANABQ14697 944 aaKnown RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 DUSP7Q16829 419 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 OR2L3Q8NG85 312 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 RAB8BQ92930 207 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 UCN3Q969E3 161 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 UBE2FQ969M7 185 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 MSLNLQ96KJ4 702 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 FUNDC2Q9BWH2 189 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 DUSP21Q9H596 190 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 SLC6A20Q9NP91 592 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 ACSS1Q9NUB1 689 aaPredicted RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 RLIMQ9NVW2 624 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 ZNF99A8MXY4 864 aaPredicted RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 ANHXE9PGG2 379 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 HAT1O14929 419 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 ERI3O43414 337 aaKnown RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 PCDHGA12O60330 932 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 KDM1AO60341 852 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 HOXB3P14651 431 aaPredicted RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 GPC1P35052 558 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 KRT20P35900 424 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 CCT3P49368 545 aaKnown RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 ABATP80404 500 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 ZNF793Q6ZN11 406 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 FBXL6Q8N531 539 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 TBC1D19Q8N5T2 526 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 SIPA1Q96FS4 1042 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 TMEM19Q96HH6 336 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 OR2M4Q96R27 311 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 FAIM2Q9BWQ8 316 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 AICDAQ9GZX7 198 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 KLHL31Q9H511 634 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 ZNF556Q9HAH1 456 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 SCHIP1Q9P0W5 487 aaPredicted RBP19.19■□□□□ 0.66
VSX1-202ENST00000376709 POFUT2Q9Y2G5 429 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 PCDHGB1Q9Y5G3 927 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 PCDHGA6Q9Y5G7 932 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 HEBP2Q9Y5Z4 205 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 COLEC10Q9Y6Z7 277 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 BRWD1Q9NSI6 2320 aa19.19■□□□□ 0.66
VSX1-202ENST00000376709 PRUNE2Q8WUY3 3088 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 POM121BA6NF01 834 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 DRD2P14416 443 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 ZNF182P17025 639 aaPredicted RBP19.18■□□□□ 0.66
VSX1-202ENST00000376709 CLDN2P57739 230 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 FOXD4Q12950 439 aaPredicted RBP19.18■□□□□ 0.66
VSX1-202ENST00000376709 SLC9A5Q14940 896 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 Q6ZPB1 254 aaPredicted RBP19.18■□□□□ 0.66
VSX1-202ENST00000376709 ENTHD1Q8IYW4 607 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms