RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PI15O43692 258 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 KIAA0513O60268 411 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 CXCL14O95715 111 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 OXSR1O95747 527 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 OSMP13725 252 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 POU2F1P14859 743 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 SPNP16150 400 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 DDCP20711 480 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 SERPINB1P30740 379 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 S100A5P33763 92 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 HOXD12P35452 270 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 OPRD1P41143 372 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 MEF2AQ02078 507 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 MEDAGQ5VYS4 303 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 SLX4IPQ5VYV7 408 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 MMP21Q8N119 569 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 OR2L2Q8NH16 312 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 SLC38A5Q8WUX1 472 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 OR5P2Q8WZ92 322 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 ZNF514Q96K75 400 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 Q96MT0 163 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 ZCCHC2Q9C0B9 1178 aaKnown RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 OR52A5Q9H2C5 316 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 C3orf14Q9HBI5 128 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 SLAMF7Q9NQ25 335 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 TAS2R16Q9NYV7 291 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 CFL2Q9Y281 166 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 TRBV4-1A0A0J9YWV2 114 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 K7ESM1 405 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 KMOO15229 486 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 SLITRK5O94991 958 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 TP53P04637 393 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 EIF2S1P05198 315 aaKnown RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 XPAP23025 273 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 KRR1Q13601 381 aaKnown RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 KCNJ8Q15842 424 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 TCTN3Q6NUS6 607 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 TMIGD1Q6UXZ0 262 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 GDPGP1Q6ZNW5 385 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 PTCHD4Q6ZW05 846 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 RTL10Q7L3V2 364 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 GET4Q7L5D6 327 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-202ENST00000376545 NLGN4XQ8N0W4 816 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 HORMAD2Q8N7B1 307 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 LMNTD1Q8N9Z9 388 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 TM4SF18Q96CE8 201 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 DEFB118Q96PH6 123 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 CHCHD6Q9BRQ6 235 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 NLNQ9BYT8 704 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 HHATLQ9HCP6 504 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 DYRK4Q9NR20 520 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 ZNF229Q9UJW7 825 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 RAB23Q9ULC3 237 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 MGAT4BQ9UQ53 548 aa10.16□□□□□ -0.78
ABCF1-202ENST00000376545 LOC100506127A0A0U1RQW1 187 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 PLPP1O14494 284 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 B4GALT2O60909 372 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 GPX5O75715 221 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 ELAVL4P26378 380 aaKnown RBP10.15□□□□□ -0.78
ABCF1-202ENST00000376545 HOXD11P31277 338 aaPredicted RBP10.15□□□□□ -0.78
ABCF1-202ENST00000376545 BSGP35613 385 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.15□□□□□ -0.78
ABCF1-202ENST00000376545 STARD3Q14849 445 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 NCF4Q15080 339 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 SEC23BQ15437 767 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 SLC25A30Q5SVS4 291 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 GDPD3Q7L5L3 318 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 SCAIQ8N9R8 606 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 POC5Q8NA72 575 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 FGF11Q92914 225 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 CCDC32Q9BV29 185 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 OR2AG1Q9H205 316 aa10.15□□□□□ -0.78
ABCF1-202ENST00000376545 SIRT3Q9NTG7 399 aaPredicted RBP10.15□□□□□ -0.78
ABCF1-202ENST00000376545 CCDC88CQ9P219 2028 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 PNMA8CA0A1B0GUJ8 204 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 LOC110117498-PIK3R3F6TDL0 507 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 MED26O95402 600 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 GTF2E2P29084 291 aaKnown RBP10.15□□□□□ -0.79
ABCF1-202ENST00000376545 CSTF2P33240 577 aaKnown RBP eCLIP10.15□□□□□ -0.79
ABCF1-202ENST00000376545 MLC1Q15049 377 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 TSTQ16762 297 aaKnown RBP10.15□□□□□ -0.79
ABCF1-202ENST00000376545 ATAD3BQ5T9A4 648 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 TMEM53Q6P2H8 277 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 CEACAM20Q6UY09 585 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 PIK3R3Q92569 461 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 SORBS1Q9BX66 1292 aaKnown RBP10.15□□□□□ -0.79
ABCF1-202ENST00000376545 UCK2Q9BZX2 261 aa10.15□□□□□ -0.79
ABCF1-202ENST00000376545 SLC35F4A4IF30 521 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 ENTPD6O75354 484 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 PTPN2P17706 415 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 SOX6P35712 828 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 KCNJ5P48544 419 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 DGKGP49619 791 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 EFNB1P98172 346 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 ALDH6A1Q02252 535 aaKnown RBP10.14□□□□□ -0.79
ABCF1-202ENST00000376545 OCLNQ16625 522 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 LRIT3Q3SXY7 679 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 PRAMEF14Q5SWL7 426 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 DEPDC1Q5TB30 811 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms