RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 TMPRSS11BQ86T26 416 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 VPS37AQ8NEZ2 397 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 CYB5D2Q8WUJ1 264 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 NEIL2Q969S2 332 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 RSPRY1Q96DX4 576 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 STOX2Q9P2F5 926 aaPredicted RBP14.47□□□□□ -0.09
MSH5-203ENST00000375750 FTSJ1Q9UET6 329 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 TMA7Q9Y2S6 64 aaKnown RBP14.47□□□□□ -0.09
MSH5-203ENST00000375750 EYSQ5T1H1 3165 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 TRBC2A0A5B9 178 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 EFCAB10A6NFE3 127 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 RGS13O14921 159 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 PRMT3O60678 531 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 CTSCP53634 463 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 LIM2P55344 173 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 ERVK-21P61565 698 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 SNRPD1P62314 119 aaKnown RBP14.47□□□□□ -0.09
MSH5-203ENST00000375750 ZFP69Q49AA0 526 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 SNAP47Q5SQN1 464 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 C22orf39Q6P5X5 142 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 Q6ZVL8 140 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 Q6ZVU0 165 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 HMGN2P46Q86SG4 172 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 NLRP8Q86W28 1048 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 RBM45Q8IUH3 476 aaKnown RBP14.47□□□□□ -0.09
MSH5-203ENST00000375750 CHTF18Q8WVB6 975 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 CRELD1Q96HD1 420 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 NECTIN4Q96NY8 510 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 SUV39H2Q9H5I1 410 aa14.47□□□□□ -0.09
MSH5-203ENST00000375750 PAQR5Q9NXK6 330 aaPredicted RBP14.47□□□□□ -0.09
MSH5-203ENST00000375750 NUFIP1Q9UHK0 495 aaKnown RBP14.47□□□□□ -0.09
MSH5-203ENST00000375750 IGLV3-16A0A075B6K0 115 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 NPIPB8E9PQR5 432 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 ZNF197O14709 1029 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 PLD2O14939 933 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CAPN5O15484 640 aaPredicted RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 CSO75390 466 aaKnown RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 CBLP22681 906 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 XCR1P46094 333 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 PXNP49023 591 aaPredicted RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 SPINT3P49223 89 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CRISP1P54107 249 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CDC42P60953 191 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 HOXC5Q00444 222 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CDK6Q00534 326 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 LRRC74AQ0VAA2 488 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 SEC23BQ15437 767 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 FRMPD2BQ6IN97 320 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 ZNF544Q6NX49 715 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 C19orf48Q6RUI8 117 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 TMIGD1Q6UXZ0 262 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 ARMCX6Q7L4S7 300 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 GLCCI1Q86VQ1 547 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 MEX3DQ86XN8 651 aaKnown RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 IQCF1Q8N6M8 205 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 VN1R2Q8NFZ6 395 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CHAC2Q8WUX2 184 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 PIK3R3Q92569 461 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 NRTNQ99748 197 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 PIP5K1AQ99755 562 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 TMEM246Q9BRR3 403 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 TAPBPLQ9BX59 468 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 C1GALT1Q9NS00 363 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 SLC25A13Q9UJS0 675 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CFL2Q9Y281 166 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 YARS2Q9Y2Z4 477 aaKnown RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 HCN4Q9Y3Q4 1203 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 TSPAN6O43657 245 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 DPM1O60762 260 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 SOCS5O75159 536 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CYP17A1P05093 508 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CHI3L1P36222 383 aaPredicted RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 PUM1Q14671 1186 aaKnown RBP eCLIP14.46□□□□□ -0.09
MSH5-203ENST00000375750 NDUFA5Q16718 116 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 TCEAL5Q5H9L2 206 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CDKL4Q5MAI5 379 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 LIPKQ5VXJ0 399 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 OLIG3Q7RTU3 272 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 HSD11B1LQ7Z5J1 315 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 TRIM48Q8IWZ4 208 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 GALNT12Q8IXK2 581 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 C2orf73Q8N5S3 287 aaPredicted RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 ZFYVE19Q96K21 471 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 CDCA4Q9BXL8 241 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 SPNS1Q9H2V7 528 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 RANGRFQ9HD47 186 aaPredicted RBP14.46□□□□□ -0.09
MSH5-203ENST00000375750 CLN6Q9NWW5 311 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 KLHL20Q9Y2M5 609 aa14.46□□□□□ -0.09
MSH5-203ENST00000375750 ZAR1LA6NP61 321 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 SEMA7AO75326 666 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 KLHL18O94889 574 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 EIF2S1P05198 315 aaKnown RBP14.45□□□□□ -0.1
MSH5-203ENST00000375750 HBQ1P09105 142 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 TIA1P31483 386 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■■■□ 19.4
MSH5-203ENST00000375750 ETV3P41162 512 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 ETV6P41212 452 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 LSM11P83369 360 aaKnown RBP eCLIP14.45□□□□□ -0.1
MSH5-203ENST00000375750 C2orf80Q0P641 193 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 TEAD4Q15561 434 aa14.45□□□□□ -0.1
MSH5-203ENST00000375750 PHOX2BQ99453 314 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms