RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FHP07954 510 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CNR2P34972 360 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PPM1AP35813 382 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 MORN1Q5T089 497 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF782Q6ZMW2 699 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PARP16Q8N5Y8 322 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 METTL27Q8N6F8 245 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 OR51G2Q8NGK0 314 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 RPL3LQ92901 407 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ACDQ96AP0 544 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 RBCK1Q9BYM8 510 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 BHLHE41Q9C0J9 482 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 JRKO75564 520 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 RGS9O75916 674 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 APODP05090 189 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 NUDT7P0C024 238 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 KHDRBS2Q5VWX1 349 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SLITRK4Q8IW52 837 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 AKAP1Q92667 903 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 F2RL3Q96RI0 385 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ERVW-1Q9UQF0 538 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 FAAHO00519 579 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 MMP2P08253 660 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SDC1P18827 310 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ITPKBP27987 946 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CRISP1P54107 249 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SCRN3Q0VDG4 424 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ATAD3CQ5T2N8 411 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SLC8B1Q6J4K2 584 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 BORAQ6PGQ7 559 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 DCP2Q8IU60 420 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GPR78Q96P69 363 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ERMAPQ96PL5 475 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 MCCC1Q96RQ3 725 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TMEM246Q9BRR3 403 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PCBD2Q9H0N5 130 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TUBB1Q9H4B7 451 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 COQ3Q9NZJ6 369 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 HSPB11Q9Y547 144 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LTBP3Q9NS15 1303 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 THSD7AQ9UPZ6 1657 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LOC285095A0A1B0GVY8 99 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GALTP07902 379 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 DNASE1L1P49184 302 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 MAD2L1BPQ15013 274 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CTU2Q2VPK5 515 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GJD3Q8N144 294 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 OR8S1Q8NH09 359 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ARRDC2Q8TBH0 407 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GAL3ST4Q96RP7 486 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TRIB3Q96RU7 358 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 A0A1W2PRG6 482 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 A8MUA0 341 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TNFRSF10BO14763 440 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 KLBQ86Z14 1044 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CELF5Q8N6W0 485 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 OR4E2Q8NGC2 313 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PMEPA1Q969W9 287 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF486Q96H40 463 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LGR4Q9BXB1 951 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 BCL2L14Q9BZR8 327 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 WDR26Q9H7D7 661 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SPEF1Q9Y4P9 236 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 AGAP5A6NIR3 686 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF701M0R085 212 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LATO43561 262 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 FUCA1P04066 466 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SBK3P0C264 359 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 MPC1LP0DKB6 136 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 KDELR2P33947 212 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 CA5AP35218 305 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 RHAGQ02094 409 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 TMIGD1Q6UXZ0 262 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 RPTNQ6XPR3 784 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GALNTL5Q7Z4T8 443 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 YIPF7Q8N8F6 280 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PROKR2Q8NFJ6 384 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 OR8K3Q8NH51 312 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 SGCDQ92629 289 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 C11orf84Q9BUA3 381 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 ADAP2Q9NPF8 381 aa6.27□□□□□ -1.41
SMC1A-202ENST00000375340 PNO1Q9NRX1 252 aaKnown RBP6.27□□□□□ -1.41
SMC1A-202ENST00000375340 LRRC37AA6NMS7 1700 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 FXYD6-FXYD2A0A087WZ82 144 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 UNC119BA6NIH7 251 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 FAM227AF5H4B4 570 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 PI15O43692 258 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 AKAP8O43823 692 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF821O75541 412 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 SLC35G6P0C7Q6 338 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MPIP34949 423 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CLK3P49761 638 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 KEAP1Q14145 624 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 PGBD2Q6P3X8 592 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RTL4Q6ZR62 310 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 WDR53Q7Z5U6 358 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms