RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CXorf40AQ8TE69 158 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 C1orf54Q8WWF1 131 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 HTR3CQ8WXA8 447 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CNOT9Q92600 299 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 TBC1D20Q96BZ9 403 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ECHDC3Q96DC8 303 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 IMP4Q96G21 291 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 MS4A14Q96JA4 679 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 SERAC1Q96JX3 654 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 ZNF641Q96N77 438 aaPredicted RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 TMEM121Q9BTD3 319 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 EDEM2Q9BV94 578 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 GTPBP2Q9BX10 602 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 TDRD1Q9BXT4 1180 aaKnown RBP4.26□□□□□ -1.73
PMS1-202ENST00000374826 CARD9Q9H257 536 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 GAREM1Q9H706 876 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 PREBQ9HCU5 417 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 TM9SF3Q9HD45 589 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 HAUS2Q9NVX0 235 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 RSPH14Q9UHP6 348 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 DNPEPQ9ULA0 475 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CHKBQ9Y259 395 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 PCDHGA5Q9Y5G8 931 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 CACNA1AO00555 2505 aa4.26□□□□□ -1.73
PMS1-202ENST00000374826 BPTFQ12830 3046 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SPEGQ15772 3267 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 C17orf113A0A1B0GUU1 675 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 FAM90A7PA6NKC0 464 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SH2D7A6NKC9 451 aaPredicted RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 FAM90A22PA8MWA6 464 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 FAM90A12PA8MX19 464 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 FAM90A23PA8MXZ1 464 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 C10orf142B7Z368 130 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 KLK10O43240 276 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 LRP3O75074 770 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 TCEA3O75764 348 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 TM7SF2O76062 418 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 PAK4O96013 591 aaPredicted RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 IFNB1P01574 187 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 PCCBP05166 539 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 ZNF806P0C7X5 589 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 GNSP15586 552 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 HNRNPA2B1P22626 353 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 CA4P22748 312 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 LHCGRP22888 699 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 TCEA1P23193 301 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 MSNP26038 577 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 AKT2P31751 481 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 BLKP51451 505 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 RPS21P63220 83 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 IL9RQ01113 521 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 BIRC2Q13490 618 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 DHX34Q14147 1143 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 IRF4Q15306 451 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SIX1Q15475 284 aaPredicted RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 DUOXA1Q1HG43 343 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 TMEM52BQ4KMG9 183 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 TEX44Q53QW1 395 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SPDYCQ5MJ68 293 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 ANKRD20A2Q5SQ80 823 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 ANKRD20A1Q5TYW2 823 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 ANKRD20A3Q5VUR7 823 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 ITPRIPL1Q6GPH6 555 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 KDELC1Q6UW63 502 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 GCNT7Q6ZNI0 430 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 RFLNAQ6ZTI6 216 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 DPPA4Q7L190 304 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 PID1Q7Z2X4 250 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 HSD11B1LQ7Z5J1 315 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 PRPF39Q86UA1 669 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 PIH1D2Q8WWB5 315 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 RAB7BQ96AH8 199 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 RMDN1Q96DB5 314 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 OXNAD1Q96HP4 312 aaPredicted RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 FEM1CQ96JP0 617 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 CAPZA3Q96KX2 299 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 APOL2Q9BQE5 337 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 MLPHQ9BV36 600 aaPredicted RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 FICDQ9BVA6 458 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 AP1M1Q9BXS5 423 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 NUSAP1Q9BXS6 441 aaKnown RBP4.25□□□□□ -1.73
PMS1-202ENST00000374826 SLC17A9Q9BYT1 436 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SLC25A51Q9H1U9 297 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 GBA3Q9H227 469 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SLC32A1Q9H598 525 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 PCDH9Q9HC56 1237 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 MALT1Q9UDY8 824 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 NDRG3Q9UGV2 375 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 AMACRQ9UHK6 382 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 SNX12Q9UMY4 172 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 JRKLQ9Y4A0 524 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 NFS1Q9Y697 457 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 COMMD10Q9Y6G5 202 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 NCOR2Q9Y618 2525 aa4.25□□□□□ -1.73
PMS1-202ENST00000374826 CROCCQ5TZA2 2017 aa4.24□□□□□ -1.73
PMS1-202ENST00000374826 SCN3AQ9NY46 2000 aa4.24□□□□□ -1.73
PMS1-202ENST00000374826 AHCTF1Q8WYP5 2266 aa4.24□□□□□ -1.73
PMS1-202ENST00000374826 SAA2-SAA4A0A096LPE2 208 aa4.24□□□□□ -1.73
PMS1-202ENST00000374826 A0A0J9YYE9 177 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms