RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HOXB2P14652 356 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 NTSR1P30989 418 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 DGKEP52429 567 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 PLA2G16P53816 162 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 DSTNP60981 165 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 RPP38P78345 283 aaKnown RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 REEP5Q00765 189 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 SPIBQ01892 262 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FGL2Q14314 439 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 SDE2Q6IQ49 451 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 ASCL5Q7RTU5 278 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 NUDT13Q86X67 352 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 LINC01555Q8NAE3 123 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TP53I13Q8NBR0 393 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 OR52J3Q8NH60 311 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 RAB2BQ8WUD1 216 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 OR5P2Q8WZ92 322 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF566Q969W8 418 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TM4SF18Q96CE8 201 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 SLC17A9Q9BYT1 436 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 XKR8Q9H6D3 395 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 PAK1IP1Q9NWT1 392 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 RAB23Q9ULC3 237 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 SH3GLB1Q9Y371 365 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 GPSM3Q9Y4H4 160 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TRPM6Q9BX84 2022 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 A0A1W2PQU0 124 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 PDZK1P1A8MUH7 402 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 NDUFS4O43181 175 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 TEAD1P28347 426 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 EPHA2P29317 976 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 RAB28P51157 221 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 NUBP1P53384 320 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 DMPKQ09013 629 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 SPDYE7PQ495Y7 208 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 CYP27C1Q4G0S4 372 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 CRB2Q5IJ48 1285 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 CEACAM20Q6UY09 585 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 CCDC80Q76M96 950 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 B3GNT8Q7Z7M8 397 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 PLD3Q8IV08 490 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 SLC30A8Q8IWU4 369 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 ADGRF3Q8IZF5 1079 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 TSTD1Q8NFU3 115 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 CAMK1GQ96NX5 476 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 FEVQ99581 238 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 C1QTNF7Q9BXJ2 289 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 C1QTNF2Q9BXJ5 285 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF717Q9BY31 904 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-202ENST00000374487 CXorf36Q9H7Y0 433 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 RASSF1Q9NS23 344 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 AASSQ9UDR5 926 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 PNMA8BQ9ULN7 279 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-202ENST00000374487 LYVE1Q9Y5Y7 322 aa11.49□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3DA0A087WVF3 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3IA0A087WXS9 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3EA0A087X179 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3KA0A087X1G2 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3FA6NER0 549 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3LB9A6J9 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 DNAJB5O75953 348 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 DNTTP04053 509 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3HP0C7X1 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ARAFP10398 606 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 GABRG2P18507 467 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 MAT2AP31153 395 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 GRK3P35626 688 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 STT3AP46977 705 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 CDH12P55289 794 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 CXCR4P61073 352 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 CSNK1G2P78368 415 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 PRDX1Q06830 199 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 HSPB3Q12988 150 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 NPTX1Q15818 432 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3GQ6DHY5 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 GTF2IRD2BQ6EKJ0 949 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3CQ6IPX1 549 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 REEP3Q6NUK4 255 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 GTF2IRD2Q86UP8 949 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 FAM124AQ86V42 546 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ARMC8Q8IUR7 673 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TBC1D3Q8IZP1 549 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 DEFB119Q8N690 84 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 GEMIN6Q8WXD5 167 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF300Q96RE9 604 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 PRRX2Q99811 253 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TIMM29Q9BSF4 260 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 MKRN2Q9H000 416 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ABCG4Q9H172 646 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 NEUROD4Q9HD90 331 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms