RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RGMAQ96B86 450 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 WFDC6Q9BQY6 131 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 YIPF4Q9BSR8 244 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 DPH7Q9BTV6 452 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 C1QTNF2Q9BXJ5 285 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 RAD21L1Q9H4I0 556 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 TMEM38AQ9H6F2 299 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 EPS8L2Q9H6S3 715 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 ICKQ9UPZ9 632 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 PCDHGA6Q9Y5G7 932 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 PCDHGA10Q9Y5H3 936 aa15.19■□□□□ 0.02
CNKSR1-202ENST00000374253 HAT1O14929 419 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 ERAL1O75616 437 aaKnown RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 RECKO95980 971 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 EGFP01133 1207 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 C8orf89P0DMQ9 161 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 CD72P21854 359 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 EIF2DP41214 584 aaKnown RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 MASP1P48740 699 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 NUDT6P53370 316 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 PRKAG1P54619 331 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 TOP3AQ13472 1001 aaPredicted RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF630Q2M218 657 aaPredicted RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 PAGE2Q7Z2X7 111 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 C6orf120Q7Z4R8 191 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 RBM45Q8IUH3 476 aaKnown RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 CCL4L1Q8NHW4 92 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 FAM81AQ8TBF8 368 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 UTP15Q8TED0 518 aaKnown RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 APH1BQ8WW43 257 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 TMEM19Q96HH6 336 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC6A20Q9NP91 592 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 SELENONQ9NZV5 590 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 ANGPT4Q9Y264 503 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 GMEB1Q9Y692 573 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 TICRRQ7Z2Z1 1910 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 C5orf58C9J3I9 102 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 CCDC159P0C7I6 412 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 RAB8AP61006 207 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC35A2P78381 396 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 OCA2Q04671 838 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 TPRG1LQ5T0D9 272 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 NDUFAF5Q5TEU4 345 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 TMEM236Q5W0B7 351 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 IL17RCQ8NAC3 791 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 VANGL1Q8TAA9 524 aaPredicted RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 CREB3L4Q8TEY5 395 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 DNASE1L2Q92874 299 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 ELSPBP1Q96BH3 223 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 HSPBAP1Q96EW2 488 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 PDXPQ96GD0 296 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 APOOQ9BUR5 198 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 ANKRA2Q9H9E1 313 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 MRPS30Q9NP92 439 aaKnown RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 SIRT3Q9NTG7 399 aaPredicted RBP15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 RNF6Q9Y252 685 aa15.18■□□□□ 0.02
CNKSR1-202ENST00000374253 SCN2AQ99250 2005 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 ADAMDEC1O15204 470 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 ERI3O43414 337 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 NDUFS2O75306 463 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 SEMA3DO95025 777 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 KLF8O95600 359 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 HOXB2P14652 356 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 PSMB9P28065 219 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 MLLT10P55197 1068 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 PCBP3P57721 371 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 MVKQ03426 396 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 RBBP4Q09028 425 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 GRSF1Q12849 480 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 PUM1Q14671 1186 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 OR4C11Q6IEV9 310 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC16A12Q6ZSM3 486 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 OR4E2Q8NGC2 313 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 FKBP10Q96AY3 582 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 SERHL2Q9H4I8 314 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 SPATA7Q9P0W8 599 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 FBXW2Q9UKT8 454 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 DNMT3AQ9Y6K1 912 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 LRIT2A6NDA9 550 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF99A8MXY4 864 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 PEBP1P30086 187 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 NTSR1P30989 418 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 GPC1P35052 558 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 HSD17B2P37059 387 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 TMBIM6P55061 237 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 SNRPNP63162 240 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 CRB2Q5IJ48 1285 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 REEP3Q6NUK4 255 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 TSPYL5Q86VY4 417 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 RAB42Q8N4Z0 105 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 OR4C15Q8NGM1 316 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 TBC1D15Q8TC07 691 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 PCBD2Q9H0N5 130 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 SCN3BQ9NY72 215 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 CLEC1BQ9P126 229 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 TSC22D4Q9Y3Q8 395 aa15.17■□□□□ 0.02
CNKSR1-202ENST00000374253 A0A1W2PQF6 199 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 PGRMC2O15173 223 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 PLRG1O43660 514 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 BCAS1O75363 584 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms