RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ZNF513Q8N8E2 541 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ROGDIQ9GZN7 287 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 TRAPPC4Q9Y296 219 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ATP11BQ9Y2G3 1177 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 PDE4DIPQ5VU43 2346 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 LOC110117498-PIK3R3F6TDL0 507 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 FGF18O76093 207 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 EIF2S1P05198 315 aaKnown RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 RB1P06400 928 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 MAGP20916 626 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 CASP3P42574 277 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TEAD2Q15562 447 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SLX4IPQ5VYV7 408 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TCTN3Q6NUS6 607 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 ADGRF3Q8IZF5 1079 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 CLIP4Q8N3C7 705 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 IL17RDQ8NFM7 739 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SETD7Q8WTS6 366 aaKnown RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 PIK3R3Q92569 461 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 LINC00615Q96LM1 132 aaPredicted RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 NLNQ9BYT8 704 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 OR2AG1Q9H205 316 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 C3orf14Q9HBI5 128 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 MIEF1Q9NQG6 463 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 CCDC177Q9NQR7 707 aaPredicted RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 MARK1Q9P0L2 795 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SPATA7Q9P0W8 599 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 DYRK3O43781 588 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 DDCP20711 480 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 ELAVL4P26378 380 aaKnown RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 PPM1AP35813 382 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 NNMTP40261 264 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 DGKEP52429 567 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 EPHA5P54756 1037 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF77Q15935 545 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 C12orf73Q69YU5 71 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TMIGD1Q6UXZ0 262 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SLC39A5Q6ZMH5 540 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 WDR53Q7Z5U6 358 aaPredicted RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 UBE2E3Q969T4 207 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 FUZQ9BT04 418 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 UCK2Q9BZX2 261 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TLR4O00206 839 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 PLPP1O14494 284 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TBX19O60806 448 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 B4GALT2O60909 372 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 PAPLNO95428 1278 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 CSTF2P33240 577 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 METAP1P53582 386 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 RPS26P62854 115 aaKnown RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TLE2Q04725 743 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
CTPS1-202ENST00000372621 TAGAPQ8N103 731 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SLC6A18Q96N87 628 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 BARHL1Q9BZE3 327 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 ZDHHC5Q9C0B5 715 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 NUAK2Q9H093 628 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 C11orf16Q9NQ32 467 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 SNX8Q9Y5X2 465 aa12.13□□□□□ -0.47
CTPS1-202ENST00000372621 C17orf113A0A1B0GUU1 675 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 OXSR1O95747 527 aaPredicted RBP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 BCHEP06276 602 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 POU1F1P28069 291 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 RPS19P39019 145 aaKnown RBP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 TRIM60Q495X7 471 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 MEDAGQ5VYS4 303 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 RNLSQ5VYX0 342 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 LCTLQ6UWM7 567 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 TRAPPC5Q8IUR0 188 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 TMEM19Q96HH6 336 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 IL4I1Q96RQ9 567 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 YME1L1Q96TA2 773 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 KCNS3Q9BQ31 491 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 SLC30A2Q9BRI3 323 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 DPEP2Q9H4A9 486 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 DYRK4Q9NR20 520 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 CLEC2DQ9UHP7 191 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 ACAD8Q9UKU7 415 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 ABHD14A-ACY1A0A1B0GW23 586 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 A8MU76 341 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 H3BQ06 376 aaPredicted RBP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 ASNA1O43681 348 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 PI15O43692 258 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 SSX4O60224 188 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 CSO75390 466 aaKnown RBP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 CD72P21854 359 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTPS1-202ENST00000372621 TNFSF8P32971 234 aa12.12□□□□□ -0.47
CTPS1-202ENST00000372621 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms