RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 CHIT1Q13231 466 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CAPRIN1Q14444 709 aaKnown RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 SLBPQ14493 270 aaKnown RBP eCLIP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 NR6A1Q15406 480 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 C6orf136Q5SQH8 315 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 RNF220Q5VTB9 566 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 MLIPQ5VWP3 458 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 LETMD1Q6P1Q0 360 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 SLC15A3Q8IY34 581 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 GALNT4Q8N4A0 578 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 GOLM1Q8NBJ4 401 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 OR4F6Q8NGB9 312 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 OR4K1Q8NGD4 311 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CT55Q8WUE5 264 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 SLC13A3Q8WWT9 602 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 LRTOMTQ8WZ04 291 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ZPBPQ9BS86 351 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 NDC1Q9BTX1 674 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CHRNA10Q9GZZ6 450 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 PCBD2Q9H0N5 130 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 KLHL31Q9H511 634 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 IPPKQ9H8X2 491 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CUTCQ9NTM9 273 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 OPTCQ9UBM4 332 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ACSL6Q9UKU0 697 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ZNF490Q9ULM2 529 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 DYRK1BQ9Y463 629 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 PCDHGA4Q9Y5G9 962 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 A0A087WV48 116 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ZNF860A6NHJ4 632 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CNOT3O75175 753 aaKnown RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CCNDBP1O95273 360 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 TBX6O95947 436 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 NPPAP01160 153 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 FURINP09958 794 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 SLC6A2P23975 617 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 STAT5AP42229 794 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CASP2P42575 452 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CLCN2P51788 898 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 NEK2P51955 445 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 UFM1P61960 85 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CXADRP78310 365 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ABHD18Q0P651 414 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 MAD2L1Q13257 205 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ERV3-1Q14264 604 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 COL28A1Q2UY09 1125 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ZNF385CQ66K41 422 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 RHBDD2Q6NTF9 364 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 METTL2BQ6P1Q9 378 aaKnown RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ARHGEF39Q8N4T4 335 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 OR2T11Q8NH01 316 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 RERGQ96A58 199 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 MTFMTQ96DP5 389 aaKnown RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 PPP3R2Q96LZ3 170 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CNBD2Q96M20 576 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ZNF285Q96NJ3 590 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CCNL2Q96S94 520 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 HBEGFQ99075 208 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 AICDAQ9GZX7 198 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 SEMA6AQ9H2E6 1030 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ALG2Q9H553 416 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 GPN2Q9H9Y4 310 aaPredicted RBP9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ARMC1Q9NVT9 282 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 ACTR3BQ9P1U1 418 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 CTSFQ9UBX1 484 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 AURKCQ9UQB9 309 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 RNF11Q9Y3C5 154 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 PCDHB3Q9Y5E6 796 aa9.06□□□□□ -0.96
TMEM254-201ENST00000372273 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.05□□□□□ -0.96
TMEM254-201ENST00000372273 K7EPI3 171 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 FXYD1O00168 92 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 SAP18O00422 153 aaKnown RBP9.05□□□□□ -0.96
TMEM254-201ENST00000372273 OR7A17O14581 309 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 RGS14O43566 566 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 FOXS1O43638 330 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 SRPX2O60687 465 aaPredicted RBP9.05□□□□□ -0.96
TMEM254-201ENST00000372273 JRKO75564 520 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 TNFAIP8O95379 198 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 C1GALT1C1LP0DN25 315 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 EPB42P16452 691 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 ATP6V1B2P21281 511 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 PEX19P40855 299 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 GCGRP47871 477 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 RAB8AP61006 207 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 OLR1P78380 273 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 IRF8Q02556 426 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 EMX2Q04743 252 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 TLR1Q15399 786 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 CPSF6Q16630 551 aaKnown RBP eCLIP9.05□□□□□ -0.96
TMEM254-201ENST00000372273 PRTGQ2VWP7 1150 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 TIGD2Q4W5G0 525 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 VWA2Q5GFL6 755 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 TBCELQ5QJ74 424 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 MANEAQ5SRI9 462 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 LCN8Q6JVE9 175 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 UGT2A3Q6UWM9 527 aa9.05□□□□□ -0.96
TMEM254-201ENST00000372273 ZNF517Q6ZMY9 492 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms