RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 DDX6P26196 483 aaKnown RBP eCLIP18.22■□□□□ 0.51
TMEM53-202ENST00000372237 GPR1P46091 355 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 KCNJ8Q15842 424 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 PRAMEF14Q5SWL7 426 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 ATAD3BQ5T9A4 648 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 DEPDC1Q5TB30 811 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 PRAMEF13Q5VWM6 474 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 DESI1Q6ICB0 168 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 C19orf48Q6RUI8 117 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 ATCAYQ86WG3 371 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 SLC38A5Q8WUX1 472 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 IL17FQ96PD4 163 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 ACAT2Q9BWD1 397 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 TMCC3Q9ULS5 477 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 PLXND1Q9Y4D7 1925 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 MOSPD3O75425 235 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 LINC00271P0C7V0 271 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 SPNP16150 400 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 METAP1P53582 386 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 KRR1Q13601 381 aaKnown RBP18.22■□□□□ 0.51
TMEM53-202ENST00000372237 NFE2L1Q14494 772 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 ZNF77Q15935 545 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.22■□□□□ 0.51
TMEM53-202ENST00000372237 VN1R5Q7Z5H4 357 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 SLC9B2Q86UD5 537 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 HORMAD2Q8N7B1 307 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 SCAIQ8N9R8 606 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 AHSPQ9NZD4 102 aa18.22■□□□□ 0.51
TMEM53-202ENST00000372237 KIAA1549LQ6ZVL6 1849 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ANKDD1BA6NHY2 528 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 TLR4O00206 839 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 SH3BP5O60239 455 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ADAP00813 363 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 FEN1P39748 380 aaKnown RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 SLC15A1P46059 708 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 MANFP55145 182 aaKnown RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 DEFA1P59665 94 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 DEFA3P59666 94 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 KRT78Q8N1N4 520 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 SETD7Q8WTS6 366 aaKnown RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 KCNS3Q9BQ31 491 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 EHD3Q9NZN3 535 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 PLAGL1Q9UM63 463 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ASF1AQ9Y294 204 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 DSPPQ9NZW4 1301 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 LRRK1Q38SD2 2015 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ENTPD6O75354 484 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 POP7O75817 140 aaKnown RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 SOX14O95416 240 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 PIPP12273 146 aaPredicted RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 OSMP13725 252 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 DDCP20711 480 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ETV6P41212 452 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ALDH9A1P49189 494 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 SSX1Q16384 188 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 ZNF547Q8IVP9 402 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 APOBEC4Q8WW27 367 aaKnown RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 NUS1Q96E22 293 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 NEURL3Q96EH8 262 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 TMEM19Q96HH6 336 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 CEP19Q96LK0 163 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 TRNT1Q96Q11 434 aaKnown RBP18.21■□□□□ 0.51
TMEM53-202ENST00000372237 UCK2Q9BZX2 261 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 HCFC2Q9Y5Z7 792 aa18.21■□□□□ 0.51
TMEM53-202ENST00000372237 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-202ENST00000372237 ASNA1O43681 348 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 OR10H3O60404 316 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 HOXD12P35452 270 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 DGKGP49619 791 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 MAPK12P53778 367 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 ST8SIA6P61647 398 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 DCST1Q5T197 706 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 SAXO2Q658L1 398 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 CCBE1Q6UXH8 406 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-202ENST00000372237 FAM92BQ6ZTR7 304 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 CCDC190Q86UF4 302 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 EFHD2Q96C19 240 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-202ENST00000372237 TAPBPLQ9BX59 468 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 DPEP2Q9H4A9 486 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 EXOSC4Q9NPD3 245 aaKnown RBP18.2■□□□□ 0.5
TMEM53-202ENST00000372237 TSC22D4Q9Y3Q8 395 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 MN1Q10571 1320 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-202ENST00000372237 C17orf113A0A1B0GUU1 675 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 H3BN98 237 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 RTCAO00442 366 aaKnown RBP18.2■□□□□ 0.5
TMEM53-202ENST00000372237 PLPP1O14494 284 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 CTDSP2O14595 271 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 KMOO15229 486 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 COQ9O75208 318 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 RHOP08100 348 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 PTPN2P17706 415 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 ACADLP28330 430 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 DOC2BQ14184 412 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 LCTLQ6UWM7 567 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 GPR32P1Q8NGA4 272 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 RAB8BQ92930 207 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 SLC35B4Q969S0 331 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 OPALINQ96PE5 141 aa18.2■□□□□ 0.5
TMEM53-202ENST00000372237 ZDHHC5Q9C0B5 715 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms