RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 TMEM52Q8NDY8 209 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 SLC44A1Q8WWI5 657 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 ATP6V1E2Q96A05 226 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 MRRFQ96E11 262 aaKnown RBP17.58■□□□□ 0.4
TMEM53-201ENST00000372235 SGCZQ96LD1 299 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 DGAT2Q96PD7 388 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 MAPKAP1Q9BPZ7 522 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 VPS11Q9H270 941 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 RPF2Q9H7B2 306 aaKnown RBP17.58■□□□□ 0.4
TMEM53-201ENST00000372235 IPPKQ9H8X2 491 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 WDR41Q9HAD4 459 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 LYARQ9NX58 379 aaKnown RBP17.58■□□□□ 0.4
TMEM53-201ENST00000372235 NINJ2Q9NZG7 142 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 PPT2Q9UMR5 302 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 ASB1Q9Y576 335 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 C17orf105B2RV13 164 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ACOT7O00154 380 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 FOXE1O00358 373 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 PEX1O43933 1283 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 SMIM24O75264 130 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ALDOAP04075 364 aaKnown RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 COL8A1P27658 744 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 MEOX1P50221 254 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 PLIN5Q00G26 463 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 SP5Q6BEB4 398 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF787Q6DD87 383 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 OPN5Q6U736 354 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF793Q6ZN11 406 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 SULF2Q8IWU5 870 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 CPSF7Q8N684 471 aaKnown RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 L3MBTL4Q8NA19 623 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ZFP62Q8NB50 900 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 C16orf52Q8NHV5 167 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 PTPMT1Q8WUK0 201 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ITLN2Q8WWU7 325 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-201ENST00000372235 IFT81Q8WYA0 676 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF592Q92610 1267 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ISL2Q96A47 359 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 OR8D2Q9GZM6 311 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 OR51B5Q9H339 312 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 DMRT3Q9NQL9 472 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF180Q9UJW8 692 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 SVILO95425 2214 aa17.57■□□□□ 0.4
TMEM53-201ENST00000372235 HMX2A2RU54 273 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 STX16-NPEPL1H3BU86 382 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 TGFBR3LH3BV60 316 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 STX16O14662 325 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 OR2J2O76002 312 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 CLDN9O95484 217 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 STT3AP46977 705 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 IRF9Q00978 393 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 CYP20A1Q6UW02 462 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF227Q86WZ6 799 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 DND1Q8IYX4 353 aaKnown RBP17.56■□□□□ 0.4
TMEM53-201ENST00000372235 GOLM1Q8NBJ4 401 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 PHF10Q8WUB8 498 aaKnown RBP17.56■□□□□ 0.4
TMEM53-201ENST00000372235 MTERF1Q99551 399 aaKnown RBP17.56■□□□□ 0.4
TMEM53-201ENST00000372235 SERPINI1Q99574 410 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 CDC42EP4Q9H3Q1 356 aaKnown RBP17.56■□□□□ 0.4
TMEM53-201ENST00000372235 AHSPQ9NZD4 102 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 CPSF2Q9P2I0 782 aaKnown RBP17.56■□□□□ 0.4
TMEM53-201ENST00000372235 SH3BGRL2Q9UJC5 107 aa17.56■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF223Q9UK11 482 aaPredicted RBP17.56■□□□□ 0.4
TMEM53-201ENST00000372235 MAST4O15021 2626 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 A0A087WUV0 522 aaPredicted RBP17.55■□□□□ 0.4
TMEM53-201ENST00000372235 E9PLN8 166 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 RTCAO00442 366 aaKnown RBP17.55■□□□□ 0.4
TMEM53-201ENST00000372235 LDB3O75112 727 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 ACSL3O95573 720 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 ARL1P40616 181 aaPredicted RBP17.55■□□□□ 0.4
TMEM53-201ENST00000372235 CCNG1P51959 295 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 RNF4P78317 190 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 IGLV3-21P80748 117 aaPredicted RBP17.55■□□□□ 0.4
TMEM53-201ENST00000372235 TNFRSF17Q02223 184 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 C3AR1Q16581 482 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 CPSF6Q16630 551 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMEM53-201ENST00000372235 MPEG1Q2M385 716 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 TECRLQ5HYJ1 363 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 RTL4Q6ZR62 310 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 GK5Q6ZS86 529 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 GOLGA7Q7Z5G4 137 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 SLC15A4Q8N697 577 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 PSD4Q8NDX1 1056 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 NUBPLQ8TB37 319 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 SLC2A12Q8TD20 617 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 GPR78Q96P69 363 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 RASL10BQ96S79 203 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 PAFAH2Q99487 392 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 VKORC1Q9BQB6 163 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 DDX31Q9H8H2 851 aaKnown RBP17.55■□□□□ 0.4
TMEM53-201ENST00000372235 MEMO1Q9Y316 297 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 NAV2Q8IVL1 2488 aa17.55■□□□□ 0.4
TMEM53-201ENST00000372235 SAP18O00422 153 aaKnown RBP17.54■□□□□ 0.4
TMEM53-201ENST00000372235 PLPP1O14494 284 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 SEMA3DO95025 777 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 GALNSP34059 522 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 GMPRP36959 345 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 MAGEA12P43365 314 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 NDUFAF5Q5TEU4 345 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms