RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SARDHQ9UL12 918 aa8.72□□□□□ -1.01
SMARCA1-202ENST00000371122 CYP8B1Q9UNU6 501 aa8.72□□□□□ -1.01
SMARCA1-202ENST00000371122 EDDM13A0A1B0GTR0 161 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 LOC285095A0A1B0GVY8 99 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 A6NHS1 94 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 C11orf98E9PRG8 122 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 EEDO75530 441 aaKnown RBP8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 RASAL1O95294 804 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 KLF8O95600 359 aaPredicted RBP8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 TFAP2AP05549 437 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 ZNF30P17039 623 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 ACSL1P33121 698 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 MNDAP41218 407 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 MASP1P48740 699 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 MAN2A2P49641 1150 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 SCN1BQ07699 218 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 C22orf42Q6IC83 251 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 Q6ZSR9 355 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 GALNT12Q8IXK2 581 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 PHOSPHO1Q8TCT1 267 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 MRPL48Q96GC5 212 aaKnown RBP8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 TM9SF2Q99805 663 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 PRR14Q9BWN1 585 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 BTBD1Q9H0C5 482 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 NANSQ9NR45 359 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 SACM1LQ9NTJ5 587 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 ZNF221Q9UK13 617 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 PCDHGB5Q9Y5G0 923 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 GPR45Q9Y5Y3 372 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 SCN1AP35498 2009 aa8.71□□□□□ -1.01
SMARCA1-202ENST00000371122 ANKRD33BA6NCL7 494 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 OR6C74A6NCV1 312 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 J3KTA2 159 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC1A7O00341 560 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 LSM1O15116 133 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TRIM3O75382 744 aaPredicted RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 KRT33AO76009 404 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 C8BP07358 591 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 PVRP15151 417 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SSTR4P31391 388 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 CNR2P34972 360 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF140P52738 457 aaPredicted RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 CLDN8P56748 225 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 OR2B6P58173 313 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 E2F2Q14209 437 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC15A4Q8N697 577 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 GATAD2BQ8WXI9 593 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 MSLNLQ96KJ4 702 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ITPAQ9BY32 194 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 QRSL1Q9H0R6 528 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 EXO5Q9H790 373 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ANKHQ9HCJ1 492 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 CNIH4Q9P003 139 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TRPS1Q9UHF7 1281 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 MCM3APO60318 1980 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TRAV6A0A075B6T7 132 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 PRAMEF33A0A0G2JMD5 474 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 PLD2O14939 933 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 PRAMEF10O60809 474 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 CAPNS1P04632 268 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 CFIP05156 583 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 JUPP14923 745 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 HNRNPA0Q13151 305 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF404Q494X3 552 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 RBM48Q5RL73 367 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SHQ1Q6PI26 577 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SHISA6Q6ZSJ9 500 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 LINGO2Q7L985 606 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 RANBP3LQ86VV4 465 aaPredicted RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF675Q8TD23 568 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 L3HYPDHQ96EM0 354 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC39A13Q96H72 371 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TMEM19Q96HH6 336 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF347Q96SE7 839 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ASPNQ9BXN1 380 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TUBB1Q9H4B7 451 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TM9SF3Q9HD45 589 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 KCMF1Q9P0J7 381 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 TNFRSF10DQ9UBN6 386 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 CDH7Q9ULB5 785 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 ABCG2Q9UNQ0 655 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 RPL36Q9Y3U8 105 aaKnown RBP8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 SHROOM3Q8TF72 1996 aa8.71□□□□□ -1.02
SMARCA1-202ENST00000371122 RAD1O60671 282 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 PRKRAO75569 313 aaKnown RBP8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 TOXO94900 526 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 PFKLP17858 780 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 MAOBP27338 520 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 CDKN2CP42773 168 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC15A1P46059 708 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 KHKP50053 298 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 LBX1P52954 281 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 ERVFC1P60507 584 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 VLDLRP98155 873 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 OLFML2AQ68BL7 652 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF544Q6NX49 715 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 RPTNQ6XPR3 784 aa8.7□□□□□ -1.02
SMARCA1-202ENST00000371122 AP3S1Q92572 193 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms