RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MAPKAP1Q9BPZ7 522 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 FAM173AQ9BQD7 235 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 TTTY12Q9BZ98 90 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 OR8D2Q9GZM6 311 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 SAYSD1Q9NPB0 183 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 NPDC1Q9NQX5 325 aaPredicted RBP14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ITGB1BP2Q9UKP3 347 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ADGRG4Q8IZF6 3080 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 AKAP9Q99996 3911 aa14.84□□□□□ -0.03
CKS1B-202ENST00000368436 ANKRD17O75179 2603 aaKnown RBP14.83□□□□□ -0.03
CKS1B-202ENST00000368436 CCDC168Q8NDH2 2452 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 OR14I1A6ND48 311 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 FAM166BA8MTA8 275 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 C17orf105B2RV13 164 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 FANCGO15287 622 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 CCNT2O60583 730 aaKnown RBP14.83□□□□□ -0.04
CKS1B-202ENST00000368436 ETHE1O95571 254 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 IGHG3P01860 377 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 S100BP04271 92 aaPredicted RBP14.83□□□□□ -0.04
CKS1B-202ENST00000368436 GSTA2P09210 222 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 HIST1H1TP22492 207 aaPredicted RBP14.83□□□□□ -0.04
CKS1B-202ENST00000368436 MSH2P43246 934 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 IGLV3-21P80748 117 aaPredicted RBP14.83□□□□□ -0.04
CKS1B-202ENST00000368436 MRPS25P82663 173 aaKnown RBP14.83□□□□□ -0.04
CKS1B-202ENST00000368436 PMPCAQ10713 525 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 HYAL4Q2M3T9 481 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 GXYLT1Q4G148 440 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 OPN5Q6U736 354 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 GK5Q6ZS86 529 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 C3orf62Q6ZUJ4 267 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 ACAD11Q709F0 780 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 ISCA2Q86U28 154 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 STAG3L4Q8TBR4 150 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 ZNF721Q8TF20 911 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 UBE2E3Q969T4 207 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 ERP44Q9BS26 406 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 UCK2Q9BZX2 261 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 GRPEL1Q9HAV7 217 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 IL1RL2Q9HB29 575 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 RNF112Q9ULX5 631 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 SPACA6W5XKT8 324 aa14.83□□□□□ -0.04
CKS1B-202ENST00000368436 INTS1Q8N201 2190 aaKnown RBP14.83□□□□□ -0.04
CKS1B-202ENST00000368436 A0A1B0GVC2 190 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 NKX2-6A6NCS4 301 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 FAM187AA6NFU0 413 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 FOXO6A8MYZ6 492 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 NPIPA2E9PIF3 369 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 NPIPA3F8WFD2 350 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 G3V3Y1 287 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 RTCAO00442 366 aaKnown RBP14.82□□□□□ -0.04
CKS1B-202ENST00000368436 SERPINB1P30740 379 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 SPRP35270 261 aaPredicted RBP14.82□□□□□ -0.04
CKS1B-202ENST00000368436 GMPRP36959 345 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 NUP107P57740 925 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 GPX6P59796 221 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 FOXO1Q12778 655 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 DLG1Q12959 904 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 CALCOCO2Q13137 446 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 MPEG1Q2M385 716 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 AP5B1Q2VPB7 878 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 GRTP1Q5TC63 336 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 MED27Q6P2C8 311 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 CHSY3Q70JA7 882 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 CDH24Q86UP0 819 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 FAM109AQ8N4B1 249 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 TMEM251Q8N6I4 163 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 OR7G3Q8NG95 312 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 SREK1Q8WXA9 508 aaKnown RBP14.82□□□□□ -0.04
CKS1B-202ENST00000368436 DPH5Q9H2P9 285 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 KCNJ16Q9NPI9 418 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 PNPLA3Q9NST1 481 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 GRHL1Q9NZI5 618 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 NUDT4Q9NZJ9 180 aa14.82□□□□□ -0.04
CKS1B-202ENST00000368436 HIVEP1P15822 2718 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 K7EPI3 171 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 BCKDKO14874 412 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 TGFB1P01137 390 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 IGKV3-11P04433 115 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 SLC35E2BP0CK96 405 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 MSX1P28360 303 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 STT3AP46977 705 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 RIPPLY3P57055 190 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 ID2Q02363 134 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 BIKQ13323 160 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 PIGGQ5H8A4 983 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 DEPDC1Q5TB30 811 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 KHDRBS2Q5VWX1 349 aaKnown RBP14.81□□□□□ -0.04
CKS1B-202ENST00000368436 SPNS3Q6ZMD2 512 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 TRILQ7L0X0 811 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 CCDC71Q8IV32 467 aaPredicted RBP14.81□□□□□ -0.04
CKS1B-202ENST00000368436 DMRTC2Q8IXT2 367 aaPredicted RBP14.81□□□□□ -0.04
CKS1B-202ENST00000368436 NUBPLQ8TB37 319 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 UBTD2Q8WUN7 234 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 EXT2Q93063 718 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 CMTM7Q96FZ5 175 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 ATOH8Q96SQ7 321 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 PHACTR1Q9C0D0 580 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 ALG9Q9H6U8 611 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 NMRAL1Q9HBL8 299 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 SH2D2AQ9NP31 389 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms