RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 FASNP49327 2511 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 TGFBR3LH3BV60 316 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PROM1O43490 865 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PLIN3O60664 434 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 LDB3O75112 727 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 SEMA3DO95025 777 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PDYNP01213 254 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PROCP04070 461 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 FAM58BPP0C7Q3 252 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 MYL2P10916 166 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 CPA3P15088 417 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 TNNI3P19429 210 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 BUD31P41223 144 aaPredicted RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 TNFSF10P50591 281 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CLCN2P51788 898 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 GPR143P51810 404 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PKNOX1P55347 436 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 TAS2R50P59544 299 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ZNF33BQ06732 778 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 SGO1Q5FBB7 561 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 LETMD1Q6P1Q0 360 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CYP20A1Q6UW02 462 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ZYG11AQ6WRX3 759 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PAGE2Q7Z2X7 111 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 RPS19BP1Q86WX3 136 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 NUDT13Q86X67 352 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 LGI4Q8N135 537 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 TMEM132CQ8N3T6 1108 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 GALNT11Q8NCW6 608 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 B3GNT7Q8NFL0 401 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 SUN3Q8TAQ9 357 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 RDH11Q8TC12 318 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 METTL6Q8TCB7 284 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 SELENOMQ8WWX9 145 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 C19orf60Q96EN9 201 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CNDP1Q96KN2 507 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 TMEM237Q96Q45 408 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ZNF382Q96SR6 550 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CSF3RQ99062 836 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 BARD1Q99728 777 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 TMEM109Q9BVC6 243 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ZNF717Q9BY31 904 aaPredicted RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 DEFB126Q9BYW3 111 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.21□□□□□ -0.94
CD48-202ENST00000368046 CDCP1Q9H5V8 836 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CLMPQ9H6B4 373 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 RPF2Q9H7B2 306 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 BRF2Q9HAW0 419 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 AGPAT4Q9NRZ5 378 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ASF1BQ9NVP2 202 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 LYARQ9NX58 379 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 ABI3Q9P2A4 366 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 RAB21Q9UL25 225 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 PPIEQ9UNP9 301 aaKnown RBP9.21□□□□□ -0.94
CD48-202ENST00000368046 STK38LQ9Y2H1 464 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ATG4BQ9Y4P1 393 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 ASB4Q9Y574 426 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 CLCA3PQ9Y6N3 262 aa9.21□□□□□ -0.94
CD48-202ENST00000368046 HELZ2Q9BYK8 2649 aaKnown RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 A0A0A6YYD5 115 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 TRAV17A0A0B4J275 112 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CCDC151A5D8V7 595 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 OR5H15A6NDH6 313 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 ULK1O75385 1050 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 EEDO75530 441 aaKnown RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 MYO1DO94832 1006 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 ESRRBO95718 433 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 KRT6AP02538 564 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 KRT6BP04259 564 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 IFNA16P05015 189 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 PPP2R1BP30154 601 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CD96P40200 585 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 KRT6CP48668 564 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 NAGLUP54802 743 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 DNAJB13P59910 316 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 LCP2Q13094 533 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 ELAVL1Q15717 326 aaKnown RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 C18orf63Q68DL7 685 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 FCRLBQ6BAA4 426 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CLNKQ7Z7G1 428 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 TRABD2AQ86V40 505 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CRLF3Q8IUI8 442 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 C4orf33Q8N1A6 199 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 ARMC10Q8N2F6 343 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 METTL4Q8N3J2 472 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 KIF2BQ8N4N8 673 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 MREGQ8N565 214 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CCNYL1Q8N7R7 359 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CDYL2Q8N8U2 506 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 BANPQ8N9N5 519 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 CCDC63Q8NA47 563 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 APCDD1LQ8NCL9 501 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 MORN4Q8NDC4 146 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 PTPMT1Q8WUK0 201 aaPredicted RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 DAZLQ92904 295 aaKnown RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 ANKRD9Q96BM1 317 aaPredicted RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 RBM18Q96H35 190 aaKnown RBP9.2□□□□□ -0.94
CD48-202ENST00000368046 NPAS2Q99743 824 aa9.2□□□□□ -0.94
CD48-202ENST00000368046 UTP23Q9BRU9 249 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms