RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CDCA4Q9BXL8 241 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 CHST8Q9H2A9 424 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 TPK1Q9H3S4 243 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 SYNDIG1Q9H7V2 258 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 NEK6Q9HC98 313 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 THSD1Q9NS62 852 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 SLC6A13Q9NSD5 602 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 STOML2Q9UJZ1 356 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 DLGAP4Q9Y2H0 992 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 PCDHGB6Q9Y5F9 930 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 U3KQV3 271 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 LAMA5O15230 3695 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 ANKRD12Q6UB98 2062 aa11.02□□□□□ -0.65
USF1-201ENST00000368019 LOC400499M0QZD8 3231 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 MYO1GB0I1T2 1018 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 GAPDHSO14556 408 aaPredicted RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 ZW10O43264 779 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 UGT2B17O75795 530 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 SLC25A14O95258 325 aaPredicted RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 KRT8P05787 483 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 HMBSP08397 361 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 FTH1P19P0C7X4 201 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 ZNF883P0CG24 379 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 EPORP19235 508 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 GADD45AP24522 165 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 DDOSTP39656 456 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 NSG1P42857 185 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 ASMTP46597 345 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 RPS5P46782 204 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 WNT3P56703 355 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 PLIN5Q00G26 463 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 IFITM2Q01629 132 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 NFATC2Q13469 925 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 DGCR6Q14129 220 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 LIPJQ5W064 366 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 ZCCHC8Q6NZY4 707 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 ERAP2Q6P179 960 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 CCBE1Q6UXH8 406 aaPredicted RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 KRT73Q86Y46 540 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 C10orf111Q8N326 155 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 SIMC1Q8NDZ2 872 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 ZNF675Q8TD23 568 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 PIH1D2Q8WWB5 315 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 RASSF5Q8WWW0 418 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 SORCS1Q8WY21 1168 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 RPL3LQ92901 407 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 SIPA1Q96FS4 1042 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 WDFY2Q96P53 400 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 LYSMD1Q96S90 227 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 BARD1Q99728 777 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 DOHHQ9BU89 302 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 SLC12A9Q9BXP2 914 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 ELOVL6Q9H5J4 265 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 FARSBQ9NSD9 589 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 SLCO3A1Q9UIG8 710 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 POU2F3Q9UKI9 436 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 PCOLCE2Q9UKZ9 415 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 RUVBL1Q9Y265 456 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 TMEM98Q9Y2Y6 226 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 PCDHGC4Q9Y5F7 938 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 PCDHGB2Q9Y5G2 931 aa11.01□□□□□ -0.65
USF1-201ENST00000368019 URB1O60287 2271 aaKnown RBP11.01□□□□□ -0.65
USF1-201ENST00000368019 IQCF5A8MTL0 148 aa11□□□□□ -0.65
USF1-201ENST00000368019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 BCAT2O15382 392 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 CAPN5O15484 640 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 SUV39H1O43463 412 aa11□□□□□ -0.65
USF1-201ENST00000368019 DKK1O94907 266 aa11□□□□□ -0.65
USF1-201ENST00000368019 PRAMEF1O95521 474 aa11□□□□□ -0.65
USF1-201ENST00000368019 GUCA1CO95843 209 aa11□□□□□ -0.65
USF1-201ENST00000368019 CD160O95971 181 aa11□□□□□ -0.65
USF1-201ENST00000368019 SRPRAP08240 638 aaKnown RBP11□□□□□ -0.65
USF1-201ENST00000368019 ADORA3P0DMS8 318 aa11□□□□□ -0.65
USF1-201ENST00000368019 CYP4B1P13584 511 aa11□□□□□ -0.65
USF1-201ENST00000368019 JUPP14923 745 aa11□□□□□ -0.65
USF1-201ENST00000368019 ITGA2P17301 1181 aa11□□□□□ -0.65
USF1-201ENST00000368019 ENDOUP21128 410 aaKnown RBP11□□□□□ -0.65
USF1-201ENST00000368019 SPAM1P38567 509 aa11□□□□□ -0.65
USF1-201ENST00000368019 CDKN2CP42773 168 aa11□□□□□ -0.65
USF1-201ENST00000368019 PNLIPRP1P54315 467 aa11□□□□□ -0.65
USF1-201ENST00000368019 AP1S2P56377 157 aa11□□□□□ -0.65
USF1-201ENST00000368019 KCNJ10P78508 379 aa11□□□□□ -0.65
USF1-201ENST00000368019 PPP1R8Q12972 351 aaKnown RBP11□□□□□ -0.65
USF1-201ENST00000368019 SLC13A2Q13183 592 aa11□□□□□ -0.65
USF1-201ENST00000368019 MAPK11Q15759 364 aa11□□□□□ -0.65
USF1-201ENST00000368019 SPANXN2Q5MJ10 180 aa11□□□□□ -0.65
USF1-201ENST00000368019 C10orf62Q5T681 223 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 ANXA8L1Q5VT79 327 aa11□□□□□ -0.65
USF1-201ENST00000368019 RNLSQ5VYX0 342 aa11□□□□□ -0.65
USF1-201ENST00000368019 ZDHHC20Q5W0Z9 365 aa11□□□□□ -0.65
USF1-201ENST00000368019 DESI1Q6ICB0 168 aa11□□□□□ -0.65
USF1-201ENST00000368019 CXorf57Q6NSI4 855 aaKnown RBP11□□□□□ -0.65
USF1-201ENST00000368019 NOXRED1Q6NXP6 359 aa11□□□□□ -0.65
USF1-201ENST00000368019 RNF130Q86XS8 419 aa11□□□□□ -0.65
USF1-201ENST00000368019 RASGRP3Q8IV61 690 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms