RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 KIAA1191Q96A73 305 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RNF121Q9H920 327 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 EDARQ9UNE0 448 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PQLC2LA1A4F0 135 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 HPGDSO60760 199 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FABP1P07148 127 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR4E1P0C645 316 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NOS3P29474 1203 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RFC2P35250 354 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC9A3R2Q15599 337 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 HOXD1Q9GZZ0 328 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 D6RAR5 112 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NRP1O14786 923 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MT-ND4P03905 459 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 HOXA9P31269 272 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GLP1RP43220 463 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 IL10RAQ13651 578 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DDX39BQ13838 428 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR8G1Q15617 311 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ADGRF1Q5T601 910 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PRAMEF17Q5VTA0 474 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PGBD2Q6P3X8 592 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 LINGO2Q7L985 606 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PHTF2Q8N3S3 785 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC5A5Q92911 643 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PCDHB18PQ96TA0 734 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 IFT22Q9H7X7 185 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC6A14Q9UN76 642 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ZC3H13Q5T200 1668 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FUOMA2VDF0 154 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ACOD1A6NK06 481 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SSX5O60225 188 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GXYLT1Q4G148 440 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ACER2Q5QJU3 275 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CPTPQ5TA50 214 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 BRAT1Q6PJG6 821 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR1J2Q8NGS2 313 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GRAPLQ8TC17 118 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NOL4LQ96MY1 436 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FERD3LQ96RJ6 166 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FAM83DQ9H4H8 585 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ZDHHC18Q9NUE0 388 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TAS2R14Q9NYV8 317 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SCML2Q9UQR0 700 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CKMT2P17540 419 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TAS2R19P59542 299 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 AKR1C8PQ5T2L2 129 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF891A8MT65 544 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF780AO75290 641 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PRKRAO75569 313 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 APBB3O95704 486 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 IFNA2P01563 188 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR8U9P0C7N5 309 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CPEP16870 476 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 KHKP50053 298 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PEX3P56589 373 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC38A9Q8NBW4 561 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 BPIFCQ8NFQ6 507 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR8U1Q8NH10 309 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 LHPPQ9H008 270 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC25A31Q9H0C2 315 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 BLOC1S4Q9NUP1 217 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GTF2A1LQ9UNN4 478 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SRPK3Q9UPE1 567 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DYRK1BQ9Y463 629 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RAB5AP20339 215 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PXNP49023 591 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CDH15P55291 814 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ESAMQ96AP7 390 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PDLIM5Q96HC4 596 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MAELQ96JY0 434 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PACRGQ96M98 296 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CTDSP1Q9GZU7 261 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 BRF2Q9HAW0 419 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 JTBO76095 146 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NFICP08651 508 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MAT2AP31153 395 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CCKARP32238 428 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MARC1Q5VT66 337 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 AMZ2Q86W34 360 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 WRNIP1Q96S55 665 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CBLCQ9ULV8 474 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NPIPB8E9PQR5 432 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TBX10O75333 385 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLCO2B1O94956 709 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 IGFBP1P08833 259 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ELK3P41970 407 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RAD52P43351 418 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ACSM1Q08AH1 577 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 LRP8Q14114 963 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SPDYE7PQ495Y7 208 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MPZL3Q6UWV2 235 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ERASQ7Z444 233 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GTF2H4Q92759 462 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ATP5SQ99766 215 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM70Q9BUB7 260 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DCDC2BA2VCK2 349 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 GTPBP1O00178 669 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CYB5AP00167 134 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 METTL15P1P0C7V9 234 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms