RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PIGRP01833 764 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 GIG44P09565 113 aaPredicted RBP3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 ALDH3B1P43353 468 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 MAGEB1P43366 347 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 POU5F1Q01860 360 aaKnown RBP3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 AKAP17AQ02040 695 aaKnown RBP3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 MARC1Q5VT66 337 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 PET117Q6UWS5 81 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 SERINC5Q86VE9 423 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 UBLCP1Q8WVY7 318 aaPredicted RBP3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 MR1Q95460 341 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 CDHR1Q96JP9 859 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 MCCC1Q96RQ3 725 aaPredicted RBP3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 RASL10BQ96S79 203 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 VIPAS39Q9H9C1 493 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 SLCO1C1Q9NYB5 712 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 SEPT10Q9P0V9 454 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 Q9UF83 564 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 NRBP1Q9UHY1 535 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 OR1A2Q9Y585 309 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 KIF25-AS1Q9Y6Z4 181 aa3.32□□□□□ -1.88
RNU4-28P-201ENST00000364739 MAGEB16A2A368 324 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 DUSP11O75319 330 aaKnown RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 OR6A2O95222 327 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 SLU7O95391 586 aaKnown RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZNF19P17023 458 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 HMGCS2P54868 508 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 RPL27P61353 136 aaKnown RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 LCP2Q13094 533 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 PTK6Q13882 451 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 SLC17A1Q14916 467 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 TWISTNBQ3B726 338 aaPredicted RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 LINC00242Q5T6M2 205 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 CAPN13Q6MZZ7 669 aaPredicted RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 ALKBH5Q6P6C2 394 aaKnown RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 VSIG1Q86XK7 387 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 SAMD12Q8N8I0 201 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 ERO1AQ96HE7 468 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 PCED1BQ96HM7 432 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZMAT2Q96NC0 199 aaKnown RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZIM3Q96PE6 472 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 TRIM7Q9C029 511 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 SRD5A3Q9H8P0 318 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 GPR173Q9NS66 373 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 DNAJB9Q9UBS3 223 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 RSPH14Q9UHP6 348 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 PSORS1C1Q9UIG5 152 aa3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 CFAP65Q6ZU64 1925 aaKnown RBP3.31□□□□□ -1.88
RNU4-28P-201ENST00000364739 FOXI3A8MTJ6 420 aaPredicted RBP3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 IFIT3O14879 490 aaKnown RBP3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 HAT1O14929 419 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 TBCAO75347 108 aaKnown RBP3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 OR1D2P34982 312 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 IER3P46695 156 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 BRCC3P46736 316 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 SCN1BQ07699 218 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 VWA2Q5GFL6 755 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 REP15Q6BDI9 236 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 WDR49Q8IV35 697 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 Q8N7P7 452 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZNF491Q8N8L2 437 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 CLEC1AQ8NC01 280 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 CCDC197Q8NCU1 140 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 DEPDC1BQ8WUY9 529 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 NTNG2Q96CW9 530 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 CCDC114Q96M63 670 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 YTHDF1Q9BYJ9 559 aaKnown RBP3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 ACPTQ9BZG2 426 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 EDEM3Q9BZQ6 932 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 CXXC4Q9H2H0 198 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 PLEK2Q9NYT0 353 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 ARMCX3Q9UH62 379 aaPredicted RBP3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 EXOC6BQ9Y2D4 811 aa3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
RNU4-28P-201ENST00000364739 BCLAF3A2AJT9 711 aaKnown RBP3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZNF487B1APH4 448 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 SAP18O00422 153 aaKnown RBP3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 E2F3O00716 465 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 SLC30A4O14863 429 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 WDR46O15213 610 aaKnown RBP3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 SYT7O43581 403 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 CCDC159P0C7I6 412 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 PPP2R1AP30153 589 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 NAAAQ02083 359 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 SLC3A1Q07837 685 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 DCAF12Q5T6F0 453 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 AGAP6Q5VW22 663 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 HSCBQ8IWL3 235 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 SPATA18Q8TC71 538 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 SNRNP27Q8WVK2 155 aaKnown RBP3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 GTSF1Q8WW33 167 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 BADQ92934 168 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 MRPL24Q96A35 216 aaKnown RBP3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 RAB3CQ96E17 227 aa3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 CITED2Q99967 270 aaPredicted RBP3.29□□□□□ -1.88
RNU4-28P-201ENST00000364739 ACEP12821 1306 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 A0A087X0K7 114 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms