RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 FAM205AQ6ZU69 1335 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 WDR81Q562E7 1941 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 IQCMA0A1B0GVH7 501 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 SHISA7A6NL88 538 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 YJEFN3A6XGL0 299 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 KPNA7A9QM74 516 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 NR5A2O00482 541 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 ARPC1BO15143 372 aaKnown RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 TNFSF12O43508 249 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 SOCS5O75159 536 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 MTRF1O75570 445 aaKnown RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 NXPH2O95156 264 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 CFC1P0CG37 223 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 TPBGLP0DKB5 382 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 DNAJB1P25685 340 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 CCND2P30279 289 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 AKT2P31751 481 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 EXOSC7Q15024 291 aaKnown RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 RFTN2Q52LD8 501 aaPredicted RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 GPAT3Q53EU6 434 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 WLSQ5T9L3 541 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 C1orf189Q5VU69 101 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 C3P1Q6ZMU1 363 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 FRRS1Q6ZNA5 592 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 USP43Q70EL4 1123 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 ADGRD2Q7Z7M1 963 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 SYVN1Q86TM6 617 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 WDR49Q8IV35 697 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 OR4N5Q8IXE1 308 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 OR9Q2Q8NGE9 314 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 DQX1Q8TE96 717 aaKnown RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 P3H4Q92791 437 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 SLCO2A1Q92959 643 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 PCED1BQ96HM7 432 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 RPGRIP1Q96KN7 1286 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 CXorf58Q96LI9 332 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 ASCL2Q99929 193 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 CBWD1Q9BRT8 395 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 FUNDC2Q9BWH2 189 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 PINK1Q9BXM7 581 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 FAM212BQ9NTI7 297 aaPredicted RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 CNOT2Q9NZN8 540 aaKnown RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 VPS54Q9P1Q0 977 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 COPS7AQ9UBW8 275 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 KLK11Q9UBX7 282 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 GAB2Q9UQC2 676 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 MRPS18CQ9Y3D5 142 aaKnown RBP3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 WIPI2Q9Y4P8 454 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZHX2Q9Y6X8 837 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 PTPRUQ92729 1446 aa3.19□□□□□ -1.9
RNU6-28P-201ENST00000362378 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 SH3PXD2BA1X283 911 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 TMEM89A2RUT3 159 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 RGSL1A5PLK6 1076 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 A8MU76 341 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 MPTX1A8MV57 137 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 K7EQD1 137 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 B4GAT1O43505 415 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 KIAA0513O60268 411 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 SYNGR4O95473 234 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 PTBP3O95758 552 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 CLDN1O95832 211 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 IGLV1-44P01699 117 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 RPLP0P05388 317 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 HIST1H2AGP0C0S8 130 aaPredicted RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 GHRP10912 638 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 EZRP15311 586 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 MMP12P39900 470 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 NUMBP49757 651 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 LIMK2P53671 638 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 GMFBP60983 142 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 DHODHQ02127 395 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 DPYSQ14117 519 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 MTHFSDQ2M296 383 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 FASTKD1Q53R41 847 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 DNAJC21Q5F1R6 531 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 CES4AQ5XG92 561 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 ARHGAP11AQ6P4F7 1023 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 FAM159AQ6UWV7 190 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 Q71RC1 249 aaPredicted RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 YRDCQ86U90 279 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 ITIH5Q86UX2 942 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 SLC22A16Q86VW1 577 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 RNF148Q8N7C7 305 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 COLGALT1Q8NBJ5 622 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 ADAD2Q8NCV1 583 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 FAM71CQ8NEG0 241 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 OR56B1Q8NGI3 324 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 OR10G7Q8NGN6 311 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 OR6F1Q8NGZ6 308 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 LIPHQ8WWY8 451 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 DNASE2BQ8WZ79 361 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 HIST1H2ACQ93077 130 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 USP28Q96RU2 1077 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 RAB40CQ96S21 281 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 JPH2Q9BR39 696 aaPredicted RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 RBM4Q9BWF3 364 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 HPS4Q9NQG7 708 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms