RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 OR5L2Q8NGL0 311 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 SARAFQ96BY9 339 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 F2RL3Q96RI0 385 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 OSBPL9Q96SU4 736 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 CAPS2Q9BXY5 557 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 PITHD1Q9GZP4 211 aaPredicted RBP19.51■□□□□ 0.71
CD47-202ENST00000361309 DDX47Q9H0S4 455 aaKnown RBP19.51■□□□□ 0.71
CD47-202ENST00000361309 EXO5Q9H790 373 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 PRDM7Q9NQW5 492 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 ZNF358Q9NW07 568 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 GPRC5BQ9NZH0 403 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 ZNF490Q9ULM2 529 aaPredicted RBP19.51■□□□□ 0.71
CD47-202ENST00000361309 ATG4BQ9Y4P1 393 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 TEX264Q9Y6I9 313 aa19.51■□□□□ 0.71
CD47-202ENST00000361309 PRAMEF4O60810 478 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 HOXB4P17483 251 aaPredicted RBP19.5■□□□□ 0.71
CD47-202ENST00000361309 KLK2P20151 261 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 IVDP26440 423 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 PIGAP37287 484 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 ID2Q02363 134 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 SERTAD2Q14140 314 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 PRAMEF9Q5VWM5 478 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 SLCO2A1Q92959 643 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 KIAA1191Q96A73 305 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 RUNDC3BQ96NL0 473 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 GPATCH1Q9BRR8 931 aaKnown RBP19.5■□□□□ 0.71
CD47-202ENST00000361309 TMEM79Q9BSE2 394 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 ST6GALNAC2Q9UJ37 374 aa19.5■□□□□ 0.71
CD47-202ENST00000361309 TRGV5A0A0B4J1U4 118 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 CLGNO14967 610 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 TAPBPO15533 448 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 ETHE1O95571 254 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 ENDOUP21128 410 aaKnown RBP19.49■□□□□ 0.71
CD47-202ENST00000361309 TGFBIQ15582 683 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 CEBPEQ15744 281 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 FBXO48Q5FWF7 155 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 PIGGQ5H8A4 983 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 ZNF721Q8TF20 911 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 CAPZA3Q96KX2 299 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 MAPKAP1Q9BPZ7 522 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 EHD1Q9H4M9 534 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 LYRM4Q9HD34 91 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 DNAJC11Q9NVH1 559 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 SPRR3Q9UBC9 169 aa19.49■□□□□ 0.71
CD47-202ENST00000361309 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.49■□□□□ 0.71
CD47-202ENST00000361309 VPS13CQ709C8 3753 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 HCN1O60741 890 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 KIR2DL3P43628 341 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 KCNC1P48547 511 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 PPP2R2AP63151 447 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 TGM3Q08188 693 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 MGAT5Q09328 741 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 ASPHQ12797 758 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 DOC2AQ14183 400 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 FRG1Q14331 258 aaKnown RBP19.48■□□□□ 0.71
CD47-202ENST00000361309 RIPPLY2Q5TAB7 128 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 ZNF793Q6ZN11 406 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 UBE3DQ7Z6J8 389 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 ANKMY2Q8IV38 441 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 ESAMQ96AP7 390 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 ANKRD9Q96BM1 317 aaPredicted RBP19.48■□□□□ 0.71
CD47-202ENST00000361309 LRRC39Q96DD0 335 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 KCNC2Q96PR1 638 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 CLEC4MQ9H2X3 399 aaPredicted RBP19.48■□□□□ 0.71
CD47-202ENST00000361309 WWOXQ9NZC7 414 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 COPS7AQ9UBW8 275 aa19.48■□□□□ 0.71
CD47-202ENST00000361309 FAM47E-STBD1D6RA91 191 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 GABRA1P14867 456 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 CD22P20273 847 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 GGT5P36269 586 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 HSPA7P48741 367 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 MORF4L2Q15014 288 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 MPEG1Q2M385 716 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 ZNF791Q3KP31 576 aaPredicted RBP19.47■□□□□ 0.71
CD47-202ENST00000361309 SLC22A10Q63ZE4 541 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 TCAIMQ8N3R3 496 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 SPATA6LQ8N4H0 392 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 SNX31Q8N9S9 440 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 PTCD3Q96EY7 689 aaKnown RBP19.47■□□□□ 0.71
CD47-202ENST00000361309 VPS39Q96JC1 886 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 CNOT10Q9H9A5 744 aaKnown RBP19.47■□□□□ 0.71
CD47-202ENST00000361309 SH2D2AQ9NP31 389 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 RASSF1Q9NS23 344 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 CRIM1Q9NZV1 1036 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 B4GALT7Q9UBV7 327 aa19.47■□□□□ 0.71
CD47-202ENST00000361309 RTCAO00442 366 aaKnown RBP19.46■□□□□ 0.71
CD47-202ENST00000361309 RFPL3SP0C7P2 107 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 ATP5A1P25705 553 aaKnown RBP19.46■□□□□ 0.71
CD47-202ENST00000361309 UQCRC1P31930 480 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 PRAMEF20Q5VT98 475 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 ADGRD1Q6QNK2 874 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 ACOT4Q8N9L9 421 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 WDR34Q96EX3 536 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 RMND5BQ96G75 393 aaPredicted RBP19.46■□□□□ 0.71
CD47-202ENST00000361309 SENP5Q96HI0 755 aaPredicted RBP19.46■□□□□ 0.71
CD47-202ENST00000361309 ROGDIQ9GZN7 287 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 DERL2Q9GZP9 239 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 ZNF703Q9H7S9 590 aaPredicted RBP19.46■□□□□ 0.71
CD47-202ENST00000361309 POPDC3Q9HBV1 291 aa19.46■□□□□ 0.71
CD47-202ENST00000361309 PLEKHA6Q9Y2H5 1048 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms