RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ADGRF3Q8IZF5 1079 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 TTLQ8NG68 377 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 NODALQ96S42 347 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 RHBGQ9H310 441 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 PPT2Q9UMR5 302 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 SNX7Q9UNH6 387 aa12.53□□□□□ -0.4
SQSTM1-201ENST00000360718 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 YY2O15391 372 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 OR1F1O43749 312 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 UGT2B11O75310 529 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 SH3BGRLO75368 114 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 SERPINA1P01009 418 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 TGFB1P01137 390 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 IST1P53990 364 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 OCA2Q04671 838 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 CD47Q08722 323 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 ABHD18Q0P651 414 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF691Q5VV52 312 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 DNAJC14Q6Y2X3 702 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 KRTCAP2Q8N6L1 136 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 REXO5Q96IC2 774 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 DPH7Q9BTV6 452 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 AHSPQ9NZD4 102 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 DLGAP4Q9Y2H0 992 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 PCDHB14Q9Y5E9 798 aa12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-201ENST00000360718 TRBC2A0A5B9 178 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 GSAPA4D1B5 854 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 OR6C74A6NCV1 312 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 OCM2P0CE71 109 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 OCMP0CE72 109 aaPredicted RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 HNRNPFP52597 415 aaKnown RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 MAZP56270 477 aaKnown RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ISL1P61371 349 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ANKDD1AQ495B1 522 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 SYT12Q8IV01 421 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 C1orf52Q8N6N3 182 aaKnown RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 OR10G6Q8NH81 332 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 NETO1Q8TDF5 533 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 TANKQ92844 425 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 MUL1Q969V5 352 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 TBC1D20Q96BZ9 403 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 CPPED1Q9BRF8 314 aaPredicted RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 TWSG1Q9GZX9 223 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC6A20Q9NP91 592 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 FSCN3Q9NQT6 498 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 KLHL20Q9Y2M5 609 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 PCDHGA2Q9Y5H1 932 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 SNX11Q9Y5W9 270 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 FEZF1A0PJY2 475 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 EVPLLA8MZ36 301 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 C2orf74A8MZ97 194 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 LMO7DNF2Z398 122 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC1A7O00341 560 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ITGAMP11215 1152 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 SDC1P18827 310 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 POLR2CP19387 275 aaPredicted RBP12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 MAPK10P53779 464 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 PLD3Q8IV08 490 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ANKRD53Q8N9V6 530 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 GPR156Q8NFN8 814 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 CHTF18Q8WVB6 975 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF566Q969W8 418 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 TESCQ96BS2 214 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 FCRL1Q96LA6 429 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 TSSK3Q96PN8 268 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 FUNDC2Q9BWH2 189 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 OR51B5Q9H339 312 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 SYNPO2LQ9H987 977 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 MAPRE3Q9UPY8 281 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 TPRKBQ9Y3C4 175 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 HSPE1-MOB4S4R3N1 261 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
SQSTM1-201ENST00000360718 GNG14A0A1W2PPG7 69 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF99A8MXY4 864 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ZW10O43264 779 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 FKBP9O95302 570 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 PIGAP37287 484 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ASMTP46597 345 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 NR1D2Q14995 579 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 DEFB133Q30KQ1 61 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ARMC6Q6NXE6 501 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 GALNT18Q6P9A2 607 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 SHQ1Q6PI26 577 aaKnown RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 LINC00299Q6ZSB3 139 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms