RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PCSK2P16519 638 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 TATDN1Q6P1N9 297 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 GID4Q8IVV7 300 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 GLIS1Q8NBF1 620 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 GLYATL2Q8WU03 294 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 KLRG1Q96E93 195 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 ASF1BQ9NVP2 202 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 SCO2O43819 266 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 HADHBP55084 474 aaKnown RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 SSX2Q16385 188 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 LRFN4Q6PJG9 635 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 NATD1Q8N6N6 113 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 SULT4A1Q9BR01 284 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 ZBTB48P10074 688 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 CDKN2CP42773 168 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 PER3P56645 1201 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 GALK2Q01415 458 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 ABHD18Q0P651 414 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 REEP3Q6NUK4 255 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 LIN37Q96GY3 246 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 MDFIC2A0A1B0GVS7 189 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NPIPA2E9PIF3 369 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NPIPA3F8WFD2 350 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 CAPN3P20807 821 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 FRKP42685 505 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 SLC18A1P54219 525 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 SNTA1Q13424 505 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF674Q2M3X9 581 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 MYLK3Q32MK0 819 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 AGTRAPQ6RW13 159 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 ZSWIM9Q86XI8 627 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 FER1L4A9Z1Z3 1794 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 POLR2CP19387 275 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 PLEKHN1Q494U1 663 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 OR4C15Q8NGM1 316 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 HK3P52790 923 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 POU6F2P78424 691 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NANOGP8Q6NSW7 305 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 TMEM53Q6P2H8 277 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 OR56A3Q8NH54 315 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 OR51A7Q8NH64 312 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 RBP7Q96R05 134 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NANOGQ9H9S0 305 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 ASB6Q9NWX5 421 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 STSP08842 583 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 UQCRC2P22695 453 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NDUFS1P28331 727 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 EMX2Q04743 252 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 DYRK1AQ13627 763 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 SHFQ7M4L6 423 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NPLOC4Q8TAT6 608 aa15.42■□□□□ 0.06
COL18A1-203ENST00000359759 NRP1O14786 923 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 BEST1O76090 585 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 AK4P27144 223 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SLC36A3Q495N2 470 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 PPP2R2DQ66LE6 453 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ELP2Q6IA86 826 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 CILP2Q8IUL8 1156 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 TMEM126BQ8IUX1 230 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 NEDD4LQ96PU5 975 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 KCNH6Q9H252 994 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 TUBG2Q9NRH3 451 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 FAIMQ9NVQ4 179 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 FBXL12Q9NXK8 326 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 TRBV2A0A0J9YWF9 115 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 VSTM5A8MXK1 200 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF821O75541 412 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-203ENST00000359759 IFNA1P01562 189 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 LCKP06239 509 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 EBLN1P0CF75 366 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 KCNAB2Q13303 367 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SHQ1Q6PI26 577 aaKnown RBP15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SLC35B2Q8TB61 432 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 PROKR1Q8TCW9 393 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 HDHD5Q9BXW7 423 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 PLEKHA3Q9HB20 300 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ADAMTS6Q9UKP5 1117 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ZER1Q7Z7L7 766 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 NSUN5Q96P11 429 aaKnown RBP15.41■□□□□ 0.06
COL18A1-203ENST00000359759 COPZ2Q9P299 210 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 TEX264Q9Y6I9 313 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 PTPN6P29350 595 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ATP6AP1Q15904 470 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 IGDCC3Q8IVU1 814 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SCML4Q8N228 414 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 HINT2Q9BX68 163 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SOWAHBA6NEL2 793 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ANKRD66B4E2M5 251 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 TPPPO94811 219 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 TMBIM6P55061 237 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 PPA1Q15181 289 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 C2orf15Q8WU43 125 aaKnown RBP15.41■□□□□ 0.06
COL18A1-203ENST00000359759 SMPDL3AQ92484 453 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF317Q96PQ6 595 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-203ENST00000359759 KATNBL1Q9H079 304 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 PCDHB16Q9NRJ7 776 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 LRFN1Q9P244 771 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms