RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RPS27LQ71UM5 84 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SLC16A9Q7RTY1 509 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 OR51G2Q8NGK0 314 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 DDX1Q92499 740 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ZBED3Q96IU2 234 aaPredicted RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ADAD1Q96M93 576 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CCM2Q9BSQ5 444 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 OSER1Q9NX31 292 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 MAFBQ9Y5Q3 323 aaPredicted RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SFTPBP07988 381 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 EPHX2P34913 555 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CXCR4P61073 352 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 GK3PQ14409 553 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 OR1J4Q8NGS1 313 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 KLHL9Q9P2J3 617 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 NR2E3Q9Y5X4 410 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 WASHC1A8K0Z3 465 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 B3GALNT1O75752 331 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ENDOUP21128 410 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 GMPRP36959 345 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 DAOAP59103 153 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CLEC4CQ8WTT0 213 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ARMC5Q96C12 935 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 LRR1Q96L50 414 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TAF1P21675 1872 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ARVCFO00192 962 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 LCKP06239 509 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 OXTRP30559 389 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 GALNT1Q10472 559 aaPredicted RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 C14orf28Q4W4Y0 310 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 FAM217AQ8IXS0 508 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 KRTCAP2Q8N6L1 136 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CD244Q9BZW8 370 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 RPS10P5Q9NQ39 176 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 PCDHB11Q9Y5F2 797 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TCRBV3S1A0A5B6 114 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 YJEFN3A6XGL0 299 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 F5H5P2 479 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TSPAN15O95858 294 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 VIPP01282 170 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 BCKDHAP12694 445 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 MAOAP21397 527 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 HSD11B1P28845 292 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 RBMS1P29558 406 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 DGKEP52429 567 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 HK3P52790 923 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 GALNT2Q10471 571 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TAF10Q12962 218 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 C1orf52Q8N6N3 182 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 RHOXF1Q8NHV9 184 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 OR8D1Q8WZ84 308 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF516Q92618 1163 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SLC29A1Q99808 456 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 DCCP43146 1447 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SMIM28A0A1B0GU29 152 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 OR6C75A6NL08 312 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CDC7O00311 574 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CXCL11O14625 94 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 FMO6PO60774 539 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 UBXN7O94888 489 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 IL12BP29460 328 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CMPK1P30085 196 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ADCYAP1R1P41586 468 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 FXYD6P3P58550 94 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SPCS2Q15005 226 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 POMZP3Q6PJE2 187 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 LPPQ93052 612 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CDKN2AIPNLQ96HQ2 116 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SLC6A7Q99884 636 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 OR10A4Q9H209 315 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 KCNK13Q9HB14 408 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 PCDHGA8Q9Y5G5 932 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 NME4O00746 187 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 B3GALT2O43825 422 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CTSEP14091 401 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 AKT2P31751 481 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 RBMXP38159 391 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MTNR1AP48039 350 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 LRP8Q14114 963 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SLBPQ14493 270 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 NBPF12Q5TAG4 269 aaPredicted RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ADAMTS16Q8TE57 1224 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 DPEP3Q9H4B8 488 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 DNAJC13O75165 2243 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 DBPQ10586 325 aaPredicted RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ENPP2Q13822 863 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF280BQ86YH2 543 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GNPDA2Q8TDQ7 276 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 C3orf49Q96BT1 292 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 FBXL18Q96ME1 805 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 OSBPL2Q9H1P3 480 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 IL37Q9NZH6 218 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SLC27A5Q9Y2P5 690 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 TBC1D3BA6NDS4 549 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 M0R129 80 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CLDN4O14493 209 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 JRKO75564 520 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CDK14O94921 469 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms