RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 A0A0J9YY10 115 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 A8MT66 165 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SIX3O95343 332 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 BPNT1O95861 308 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 OR4F3Q6IEY1 312 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SYCE2Q6PIF2 218 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 CCDC36Q8IYA8 594 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SPRYD4Q8WW59 207 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 PMM1Q92871 262 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SLCO2A1Q92959 643 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 C14orf166Q9Y224 244 aaKnown RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PROM1O43490 865 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SGCAQ16586 387 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 AQP11Q8NBQ7 271 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PYURFQ96I23 114 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 XKR8Q9H6D3 395 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 ABCA3Q99758 1704 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 BLACEA4D250 179 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 FAM159BA6NKW6 160 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 HCRTO43612 131 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 C6orf47O95873 294 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 ELF3P78545 371 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 NTHL1P78549 312 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 TGFBR3Q03167 851 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 HTR3DQ70Z44 454 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 JAGN1Q8N5M9 183 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.55□□□□□ -0.72
FN1-205ENST00000357867 DIRAS2Q96HU8 199 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 MS4A4AQ96JQ5 239 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 NODALQ96S42 347 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PAK6Q9NQU5 681 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 FEZF1A0PJY2 475 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 C9JVG2 144 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 TNFRSF21O75509 655 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 CRTC2Q53ET0 693 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 TPRG1LQ5T0D9 272 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 MPP7Q5T2T1 576 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SSX6Q7RTT6 188 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 CHCHD4Q8N4Q1 142 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 SCAMP4Q969E2 229 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 TBX5Q99593 518 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 COPS4Q9BT78 406 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 TUBB3Q13509 450 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 LRRC26Q2I0M4 334 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 HNRNPA1L2Q32P51 320 aaKnown RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 CRELD2Q6UXH1 353 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 ZNF382Q96SR6 550 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PISDQ9UG56 409 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 MCTS1Q9ULC4 181 aaKnown RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 TRBC2A0A5B9 178 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 C11orf98E9PRG8 122 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PLD2O14939 933 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 MAFKO60675 156 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 KCNK5O95279 499 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 PVALBP20472 110 aaPredicted RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 PLET1Q6UQ28 207 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 NXPE4Q6UWF7 544 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 GID4Q8IVV7 300 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 KBTBD2Q8IY47 623 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 RHEBL1Q8TAI7 183 aa10.55□□□□□ -0.72
FN1-205ENST00000357867 POLDIP3Q9BY77 421 aaKnown RBP10.55□□□□□ -0.72
FN1-205ENST00000357867 RPP14O95059 124 aaKnown RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 GDF5P43026 501 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 RNASE12Q5GAN4 147 aaKnown RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 BANPQ8N9N5 519 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 RBM15BQ8NDT2 890 aaKnown RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 JPH3Q8WXH2 748 aaPredicted RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 SLC2A6Q9UGQ3 507 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 A6NLC8 198 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 EIF3FO00303 357 aaPredicted RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 PDYNP01213 254 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 NCK1P16333 377 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 CD70P32970 193 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 TAS2R43P59537 309 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 KIR2DS3Q14952 304 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 ZNF648Q5T619 568 aaPredicted RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 SCRN2Q96FV2 425 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 SLCO3A1Q9UIG8 710 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 BEST1O76090 585 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 ACSL1P33121 698 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 RORCP51449 518 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 HERV-K104P61576 105 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 E2F1Q01094 437 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 MEF2AQ02078 507 aaPredicted RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 SCN1BQ07699 218 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 NIPAL4Q0D2K0 466 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 DEFB133Q30KQ1 61 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 LAS2Q8IYD9 372 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 GORASP1Q9BQQ3 440 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 ZFC3H1O60293 1989 aaKnown RBP10.54□□□□□ -0.72
FN1-205ENST00000357867 S1PR1P21453 382 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 P2RY2P41231 377 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 YPEL5P62699 121 aa10.54□□□□□ -0.72
FN1-205ENST00000357867 NFE2L1Q14494 772 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms