RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CCSMST1Q4G0I0 132 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
RTN4-204ENST00000357732 ERAP2Q6P179 960 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 XKRXQ6PP77 449 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 Q6ZVL8 140 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 GDPD1Q8N9F7 314 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 ASCC1Q8N9N2 400 aaKnown RBP16.87■□□□□ 0.29
RTN4-204ENST00000357732 ZNF480Q8WV37 535 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 GLYATL1Q969I3 302 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 ACSL6Q9UKU0 697 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 PCM1Q15154 2024 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 C5orf58C9J3I9 102 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 TPST2O60704 377 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 C1orf105O95561 183 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 IL7P13232 177 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 NPPBP16860 134 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 GABRR2P28476 465 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 RFX2P48378 723 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 TAS2R50P59544 299 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 CDK10Q15131 360 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 ZNF79Q15937 498 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 DCST1Q5T197 706 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 HSDL2Q6YN16 418 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 SLC34A3Q8N130 599 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 LINC00471Q8N535 108 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 RASGEF1AQ8N9B8 481 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 GPR151Q8TDV0 419 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 SLC25A46Q96AG3 418 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 NEURL3Q96EH8 262 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 ST6GAL2Q96JF0 529 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 MSLNLQ96KJ4 702 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 PHOX2BQ99453 314 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 RIOK2Q9BVS4 552 aaKnown RBP16.87■□□□□ 0.29
RTN4-204ENST00000357732 SCN5AQ14524 2016 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 SEMA3DO95025 777 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 SOAT1P35610 550 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 WDR5P61964 334 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 PUM1Q14671 1186 aaKnown RBP eCLIP16.86■□□□□ 0.293e-8■□□□□ 8.3
RTN4-204ENST00000357732 LARS2Q15031 903 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 NDUFA9Q16795 377 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 DUSP7Q16829 419 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 SAXO2Q658L1 398 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 KIAA1211LQ6NV74 962 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 CMTM8Q8IZV2 173 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 OR2A12Q8NGT7 310 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 MED18Q9BUE0 208 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 MCOLN1Q9GZU1 580 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 HMX1Q9NP08 348 aaPredicted RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 MIEF1Q9NQG6 463 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 ACAD8Q9UKU7 415 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 DIMT1Q9UNQ2 313 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 NOX1Q9Y5S8 564 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 DENND4CQ5VZ89 1909 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 IRGMA1A4Y4 181 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 H3BM21 787 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 FFAR1O14842 300 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 MYL12BO14950 172 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 SSX4O60224 188 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 SH3BGRLO75368 114 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 ELAVL4P26378 380 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 POU1F1P28069 291 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 PREPP48147 710 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 CASP9P55211 416 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 MRPS15P82914 257 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 ZNF91Q05481 1191 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 COX10Q12887 443 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 GLYR1Q49A26 553 aaPredicted RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 CD300LDQ6UXZ3 194 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 Q6ZVU0 165 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 NRSN1Q8IZ57 195 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 Q8N9G6 341 aaPredicted RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 CHST14Q8NCH0 376 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 HCAR2Q8TDS4 363 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 TMEM169Q96HH4 297 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 POLR2J2Q9GZM3 115 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 TRIM39Q9HCM9 518 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 NEUROD4Q9HD90 331 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 DDX28Q9NUL7 540 aaKnown RBP16.86■□□□□ 0.29
RTN4-204ENST00000357732 AHSPQ9NZD4 102 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 SNX7Q9UNH6 387 aa16.86■□□□□ 0.29
RTN4-204ENST00000357732 TRBV4-1A0A0J9YWV2 114 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 NRG2O14511 850 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 IRS1P35568 1242 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 ETV3P41162 512 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 DGKGP49619 791 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 XKP51811 444 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 CTSCP53634 463 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 ATN1P54259 1190 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 LIM2P55344 173 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 MC1RQ01726 317 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 BNC1Q01954 994 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 TMEM115Q12893 351 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 TP53BP2Q13625 1128 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 HEPACAMQ14CZ8 416 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 ZNF658BQ4V348 819 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 NXPE4Q6UWF7 544 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms