RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 C9orf62Q8N4C0 152 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 NLGN4YQ8NFZ3 816 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 AKAP1Q92667 903 aaKnown RBP eCLIP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 C11orf24Q96F05 449 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 KCNJ15Q99712 375 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TXNL4BQ9NX01 149 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TEKT2Q9UIF3 430 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 DIMT1Q9UNQ2 313 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 YBX2Q9Y2T7 364 aaKnown RBP10.18□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF451Q9Y4E5 1061 aa10.18□□□□□ -0.78
CAPN3-205ENST00000357568 TLR4O00206 839 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 CDRT1O95170 752 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 MPC1LP0DKB6 136 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OSMP13725 252 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ATF6P18850 670 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ACRV1P26436 265 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 FGF9P31371 208 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 CNR2P34972 360 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 UBE3AQ05086 875 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 TP53BP2Q13625 1128 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 SPOUT1Q5T280 376 aaKnown RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 GCNT6Q5T4J0 391 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 KLHL17Q6TDP4 642 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF730Q6ZMV8 503 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 DNAJB7Q7Z6W7 309 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 GPR65Q8IYL9 337 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 CBARPQ8N350 705 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 FBXL6Q8N531 539 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OR7D4Q8NG98 312 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OR52N2Q8NGI0 321 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OR4A15Q8NGL6 344 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 LKAAEAR1Q8TD35 194 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 EXOC2Q96KP1 924 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 KCTD7Q96MP8 289 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 SLC12A9Q9BXP2 914 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 PIGUQ9H490 435 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 SPATA6Q9NWH7 488 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 SPG21Q9NZD8 308 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 MGAT4BQ9UQ53 548 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 PLXNA4Q9HCM2 1894 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 A0A0D9SEW6 157 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 H3BM21 787 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 GAPDHSO14556 408 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 SLC22A5O76082 557 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 LRATO95237 230 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 CPSF4O95639 269 aaKnown RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 EFEMP2O95967 443 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 PDGFAP04085 211 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 PSKH1P11801 424 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OR1G1P47890 313 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ALDH6A1Q02252 535 aaKnown RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 KCNC3Q14003 757 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ARHGEF7Q14155 803 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 DUSP6Q16828 381 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF630Q2M218 657 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 PLK5Q496M5 336 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 HSD17B12Q53GQ0 312 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 AMIGO1Q86WK6 493 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OXR1Q8N573 874 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 OR8J1Q8NGP2 316 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 VANGL1Q8TAA9 524 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 LRRC20Q8TCA0 184 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 POLR2J2Q9GZM3 115 aaKnown RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 NKX2-4Q9H2Z4 354 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 BRF2Q9HAW0 419 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 BPIFA1Q9NP55 256 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 MRPS18AQ9NVS2 196 aaKnown RBP10.17□□□□□ -0.78
CAPN3-205ENST00000357568 ADAM30Q9UKF2 790 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 TMCC3Q9ULS5 477 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 STON1Q9Y6Q2 735 aa10.17□□□□□ -0.78
CAPN3-205ENST00000357568 TUBAL3A6NHL2 446 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 LYRM1O43325 122 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 ACSL4O60488 711 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 B4GALT3O60512 393 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 ENTPD6O75354 484 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 GADD45GO95257 159 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 CA3P07451 260 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 ZDHHC11BP0C7U3 371 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 ARSBP15848 533 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 SOX3P41225 446 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 STK19P49842 368 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 MAPK12P53778 367 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 DAB2P98082 770 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 EEF1A2Q05639 463 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 SMARCB1Q12824 385 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 HNRNPA0Q13151 305 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 NFATC2Q13469 925 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TPBGQ13641 420 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 DOC2BQ14184 412 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 COL28A1Q2UY09 1125 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 C3orf38Q5JPI3 329 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 C10orf120Q5SQS8 335 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 CPTPQ5TA50 214 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TRIM48Q8IWZ4 208 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 GPALPP1Q8IXQ4 340 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 KLHDC8AQ8IYD2 350 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 CLECL1Q8IZS7 167 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 FBXO32Q969P5 355 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TIFAQ96CG3 184 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 386.2 ms