RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 FAM170BA6NMN3 283 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 FABP3P05413 133 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 THRBP10828 461 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 CMPK1P30085 196 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 KCNAB2Q13303 367 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 TDGQ13569 410 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 MEP1AQ16819 746 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 SLC36A3Q495N2 470 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 LIN52Q52LA3 116 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 TMEM107Q6UX40 140 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 R3HCC1LQ7Z5L2 792 aaKnown RBP16.72■□□□□ 0.27
NPAS3-202ENST00000356141 SIX5Q8N196 739 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 PARP8Q8N3A8 854 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 RSC1A1Q92681 617 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 TAMM41Q96BW9 452 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 PHOX2BQ99453 314 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 WFDC6Q9BQY6 131 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 IL21RQ9HBE5 538 aa16.72■□□□□ 0.27
NPAS3-202ENST00000356141 SUV39H1O43463 412 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 DCNP07585 359 aaKnown RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 RETP07949 1114 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 AGXTP21549 392 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 HEPACAMQ14CZ8 416 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 GCNT6Q5T4J0 391 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 CPZQ66K79 652 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 PTCRAQ6ISU1 281 aaPredicted RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 ZBTB46Q86UZ6 589 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 EID3Q8N140 333 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 C11orf65Q8NCR3 313 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 ABTB1Q969K4 478 aaPredicted RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 BBS4Q96RK4 519 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 NLNQ9BYT8 704 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 ING2Q9H160 280 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 KIR3DX1Q9H7L2 352 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 MVB12BQ9H7P6 319 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 EVA1BQ9NVM1 165 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 HRASLS2Q9NWW9 162 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 SAMD4AQ9UPU9 718 aaKnown RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 M0R129 80 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 HNRNPCP07910 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 OR12D1P0DN82 309 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 RRM2P31350 389 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 SIM1P81133 766 aaPredicted RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 PCDH1Q08174 1060 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 EIF2B5Q13144 721 aaKnown RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 CCDC80Q76M96 950 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 PAGE2Q7Z2X7 111 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 OR5T3Q8NGG3 340 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 SNRNP27Q8WVK2 155 aaKnown RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 ANKRD60Q9BZ19 345 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 PCBD2Q9H0N5 130 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 SIRT5Q9NXA8 310 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 CNOT11Q9UKZ1 510 aaKnown RBP16.71■□□□□ 0.27
NPAS3-202ENST00000356141 MYRFQ9Y2G1 1151 aa16.71■□□□□ 0.27
NPAS3-202ENST00000356141 GPR89AB7ZAQ6 455 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 GPR89BP0CG08 455 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 UGT2B7P16662 529 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 CAPGP40121 348 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 ALDH3A2P51648 485 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 CDK6Q00534 326 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 PDE7AQ13946 482 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 DUSP7Q16829 419 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 CYP4Z1Q86W10 505 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 RBM45Q8IUH3 476 aaKnown RBP16.7■□□□□ 0.26
NPAS3-202ENST00000356141 METTL27Q8N6F8 245 aaPredicted RBP16.7■□□□□ 0.26
NPAS3-202ENST00000356141 ATG16L2Q8NAA4 619 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 C16orf58Q96GQ5 468 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 GLIPR2Q9H4G4 154 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 PRAMEF25A6NGN4 478 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 H3BSA7 217 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 AIFM1O95831 613 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 TXNL4AP83876 142 aaKnown RBP16.7■□□□□ 0.26
NPAS3-202ENST00000356141 LASP1Q14847 261 aaKnown RBP16.7■□□□□ 0.26
NPAS3-202ENST00000356141 NEDD8Q15843 81 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 SYPL1Q16563 259 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 SPATS1Q496A3 300 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 C6orf120Q7Z4R8 191 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 VN1R4Q7Z5H5 301 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 C11orf74Q86VG3 221 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 MEX3DQ86XN8 651 aaKnown RBP16.7■□□□□ 0.26
NPAS3-202ENST00000356141 ADHFE1Q8IWW8 467 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 CNIH3Q8TBE1 160 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 FAM131CQ96AQ9 280 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 PRR14Q9BWN1 585 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 CHST8Q9H2A9 424 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 RASSF1Q9NS23 344 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 CPNE7Q9UBL6 633 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 SCML1Q9UN30 329 aa16.7■□□□□ 0.26
NPAS3-202ENST00000356141 HEMK1Q9Y5R4 338 aaPredicted RBP16.7■□□□□ 0.26
NPAS3-202ENST00000356141 PTGES3LE9PB15 166 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 PRICKLE3O43900 615 aaPredicted RBP16.69■□□□□ 0.26
NPAS3-202ENST00000356141 H6PDO95479 791 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 BMP8BP34820 402 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 HSD17B2P37059 387 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 FZD2Q14332 565 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 SLC9A5Q14940 896 aa16.69■□□□□ 0.26
NPAS3-202ENST00000356141 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
NPAS3-202ENST00000356141 TSSK4Q6SA08 328 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms