RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 C1orf50Q9BV19 199 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 WDR55Q9H6Y2 383 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 C5AR2Q9P296 337 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 MRPS33Q9Y291 106 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 CLDN4O14493 209 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 HDAC3O15379 428 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 IL3P08700 152 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 PPP2R1BP30154 601 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 TLX1P31314 330 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 BUD31P41223 144 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 GYS2P54840 703 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 C6orf136Q5SQH8 315 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 QSOX2Q6ZRP7 698 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 RAB43Q86YS6 212 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 SCUBE1Q8IWY4 988 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 ZNF595Q8IYB9 648 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 ADAMTS18Q8TE60 1221 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 C16orf78Q8WTQ4 265 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 METTL21AQ8WXB1 218 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 THOC1Q96FV9 657 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 EGLN2Q96KS0 407 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 AKTIPQ9H8T0 292 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 PRDM9Q9NQV7 894 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 RIC8BQ9NVN3 520 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 P4HTMQ9NXG6 502 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 MS4A12Q9NXJ0 267 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 BAIAP2L1Q9UHR4 511 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 CLDN16Q9Y5I7 305 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 PKD1L2Q7Z442 2459 aa16.79■□□□□ 0.28
PDLIM7-202ENST00000355841 GOLGA8QA0A0J9YX86 632 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 A0A1W2PS29 197 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 GOLGA8OA6NCC3 632 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 NPIPB8E9PQR5 432 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 GOLGA8NF8WBI6 632 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 FGF17O60258 216 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 MYO1DO94832 1006 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ALDH9A1P49189 494 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 CHAF1BQ13112 559 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 COL28A1Q2UY09 1125 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 FAM180BQ6P0A1 224 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 TMEM205Q6UW68 189 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 RGS9BPQ6ZS82 235 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ANKRD37Q7Z713 158 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 KIRREL3Q8IZU9 778 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 FNDC5Q8NAU1 212 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 PLPP5Q8NEB5 264 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 OR11G2Q8NGC1 345 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 CLHC1Q8NHS4 586 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ANKRD9Q96BM1 317 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 PPP3R2Q96LZ3 170 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 CCT7Q99832 543 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 MEAF6Q9HAF1 191 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 SIRT5Q9NXA8 310 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 HEY2Q9UBP5 337 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 FBXL4Q9UKA2 621 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 EPG5Q9HCE0 2579 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 IGKV3D-11A0A0A0MRZ8 115 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 SDHDO14521 159 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ZNF195O14628 629 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 CTNSO60931 367 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ACPPP15309 386 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 EPHA3P29320 983 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 MDH1P40925 334 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 HSD17B7P56937 341 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 FOLH1Q04609 750 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ZNF763Q0D2J5 394 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 MED25Q71SY5 747 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 HOMEZQ8IX15 550 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 GFM2Q969S9 779 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 TSSK3Q96PN8 268 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 PFDN4Q9NQP4 134 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 MAN2B2Q9Y2E5 1009 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 MMACHCQ9Y4U1 282 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 USH1CQ9Y6N9 552 aa16.78■□□□□ 0.28
PDLIM7-202ENST00000355841 ITPR1Q14643 2758 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 NUP210LQ5VU65 1888 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 ARGFXA6NJG6 315 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 A8MUA0 341 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 SEC24DO94855 1032 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 IGHEP01854 428 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 SDC1P18827 310 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 STX4Q12846 297 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 ZNF750Q32MQ0 723 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 SLC9B1Q4ZJI4 515 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 CRTC2Q53ET0 693 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 SFT2D3Q587I9 215 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 CPZQ66K79 652 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 FCRL1Q96LA6 429 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 WDR41Q9HAD4 459 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 POLHQ9Y253 713 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 PCDHA9Q9Y5H5 950 aa16.77■□□□□ 0.28
PDLIM7-202ENST00000355841 ATMQ13315 3056 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 TCRBV16S1A1N1A0A5B0 115 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 SLCO1B7G3V0H7 640 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 PEX12O00623 359 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 GUCY1B2O75343 617 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 LRATO95237 230 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 COX6A1P12074 109 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 BCKDHAP12694 445 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms