RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 LRFN1Q9P244 771 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 RBMS1P29558 406 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 UFM1P61960 85 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 GOLGA7Q7Z5G4 137 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 TICAM1Q8IUC6 712 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 SAMD12Q8N8I0 201 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 TUBG2Q9NRH3 451 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 FAM120CQ9NX05 1096 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 YJEFN3A6XGL0 299 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 TPPPO94811 219 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 CDH15P55291 814 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 SLC36A3Q495N2 470 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 ZNF572Q7Z3I7 529 aaPredicted RBP5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 NPAS3Q8IXF0 933 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 CCDC116Q8IYX3 515 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 BANPQ8N9N5 519 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 NANOS1Q8WY41 292 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 RNF38Q9H0F5 515 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 ACTR3BQ9P1U1 418 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 KLHL13Q9P2N7 655 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 PCDHAC2Q9Y5I4 1007 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 LOC102723532A0A0G2JNH3 316 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 HMX3A6NHT5 357 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 A8MVJ9 347 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 MT-ND2P03891 347 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 SLC9A3P48764 834 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 PRKXP51817 358 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 SLAMF1Q13291 335 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 ELOCQ15369 112 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 HRASLS2Q9NWW9 162 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 GHRLQ9UBU3 117 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 LGALS13Q9UHV8 139 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 OR8U9P0C7N5 309 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 TNFSF4P23510 183 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 PLCXD2Q0VAA5 305 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 ZNF630Q2M218 657 aaPredicted RBP5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 LRIT3Q3SXY7 679 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 GPR149Q86SP6 731 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 POTEKPQ9BYX7 375 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 GKN1Q9NS71 199 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 SCML2Q9UQR0 700 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 DUX1O43812 170 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 PPP1R8Q12972 351 aaKnown RBP5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 RPL13AP3Q6NVV1 102 aa5.57□□□□□ -1.52
SRGAP1-201ENST00000355086 A0A1W2PPK0 400 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 MT-CO2P00403 227 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 ZNF763Q0D2J5 394 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TEAD2Q15562 447 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 C6orf183Q5T699 404 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CLEC4CQ8WTT0 213 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TSGA13Q96PP4 275 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 C17orf62Q9BQA9 187 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 ABRACLQ9P1F3 81 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 EXTL2Q9UBQ6 330 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 NWD1Q149M9 1564 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 SMPD1P17405 629 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 Q8N402 240 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 NUP43Q8NFH3 380 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 ZNF675Q8TD23 568 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CANT1Q8WVQ1 401 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TCEAL4Q96EI5 215 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 AURKBQ96GD4 344 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TGM7Q96PF1 710 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CD93Q9NPY3 652 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TMEM14AQ9Y6G1 99 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 INPPL1O15357 1258 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 ZBTB48P10074 688 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TRMT10BQ6PF06 316 aaKnown RBP5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TXN2Q99757 166 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 PDE7BQ9NP56 450 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 HIF1ANQ9NWT6 349 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 YIPF1Q9Y548 306 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 RNF144AP50876 292 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 GAS6Q14393 721 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 PLEKHG7Q6ZR37 379 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CEACAM19Q7Z692 300 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 OR2AP1Q8NGE2 309 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 OR9K2Q8NGE7 335 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CDKN2AIPNLQ96HQ2 116 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 OXSMQ9NWU1 459 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CACNG4Q9UBN1 327 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 GPR34Q9UPC5 381 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 EBLN1P0CF75 366 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 RAB30Q15771 203 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 ANKK1Q8NFD2 765 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 OR4K1Q8NGD4 311 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 CEP152O94986 1710 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 LIPKQ5VXJ0 399 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 C6orf120Q7Z4R8 191 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 NRROSQ86YC3 692 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 OR4F6Q8NGB9 312 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 SAMD11Q96NU1 681 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 RABL2AQ9UBK7 228 aaPredicted RBP5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 RABL2BQ9UNT1 228 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TRBV2A0A0J9YWF9 115 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 ZNF860A6NHJ4 632 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 RTCAO00442 366 aaKnown RBP5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 DFNA5O60443 496 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 LYPLA2O95372 231 aa5.56□□□□□ -1.52
SRGAP1-201ENST00000355086 TSPAN15O95858 294 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms