RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 AGTRAPQ6RW13 159 aa17.01■□□□□ 0.31
APP-202ENST00000348990 USP45Q70EL2 814 aa17.01■□□□□ 0.31
APP-202ENST00000348990 RDH10Q8IZV5 341 aa17.01■□□□□ 0.31
APP-202ENST00000348990 SCAMP4Q969E2 229 aa17.01■□□□□ 0.31
APP-202ENST00000348990 SLC25A46Q96AG3 418 aa17.01■□□□□ 0.31
APP-202ENST00000348990 C2orf49Q9BVC5 232 aaPredicted RBP17.01■□□□□ 0.31
APP-202ENST00000348990 GPATCH2Q9NW75 528 aa17.01■□□□□ 0.31
APP-202ENST00000348990 ZNF840PA6NDX5 716 aa17■□□□□ 0.31
APP-202ENST00000348990 SLC30A4O14863 429 aa17■□□□□ 0.31
APP-202ENST00000348990 SYN3O14994 580 aa17■□□□□ 0.31
APP-202ENST00000348990 HPGDSO60760 199 aa17■□□□□ 0.31
APP-202ENST00000348990 RHCEP18577 417 aa17■□□□□ 0.31
APP-202ENST00000348990 PREPP48147 710 aa17■□□□□ 0.31
APP-202ENST00000348990 SNAPC1Q16533 368 aa17■□□□□ 0.31
APP-202ENST00000348990 CCSMST1Q4G0I0 132 aa17■□□□□ 0.31
APP-202ENST00000348990 KIAA1841Q6NSI8 718 aa17■□□□□ 0.31
APP-202ENST00000348990 CRTC1Q6UUV9 634 aa17■□□□□ 0.31
APP-202ENST00000348990 GDPGP1Q6ZNW5 385 aa17■□□□□ 0.31
APP-202ENST00000348990 RNF165Q6ZSG1 346 aa17■□□□□ 0.31
APP-202ENST00000348990 XCR1P46094 333 aa17■□□□□ 0.31
APP-202ENST00000348990 BDKRB1P46663 353 aa17■□□□□ 0.31
APP-202ENST00000348990 AVPR1BP47901 424 aa17■□□□□ 0.31
APP-202ENST00000348990 SLC6A12P48065 614 aa17■□□□□ 0.31
APP-202ENST00000348990 TAS2R50P59544 299 aa17■□□□□ 0.31
APP-202ENST00000348990 RPS25P62851 125 aaKnown RBP17■□□□□ 0.31
APP-202ENST00000348990 MAB21L1Q13394 359 aa17■□□□□ 0.31
APP-202ENST00000348990 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
APP-202ENST00000348990 LIPJQ5W064 366 aa17■□□□□ 0.31
APP-202ENST00000348990 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
APP-202ENST00000348990 OR7G3Q8NG95 312 aa17■□□□□ 0.31
APP-202ENST00000348990 AP3S1Q92572 193 aa17■□□□□ 0.31
APP-202ENST00000348990 SPATA9Q9BWV2 254 aa17■□□□□ 0.31
APP-202ENST00000348990 SEMA3GQ9NS98 782 aa17■□□□□ 0.31
APP-202ENST00000348990 FTSJ1Q9UET6 329 aa17■□□□□ 0.31
APP-202ENST00000348990 PTPRDP23468 1912 aa17■□□□□ 0.31
APP-202ENST00000348990 ASGR1P07306 291 aa17■□□□□ 0.31
APP-202ENST00000348990 OSMP13725 252 aa17■□□□□ 0.31
APP-202ENST00000348990 B4GALNT1Q00973 533 aa17■□□□□ 0.31
APP-202ENST00000348990 ALDH6A1Q02252 535 aaKnown RBP17■□□□□ 0.31
APP-202ENST00000348990 MGAT3Q09327 533 aa17■□□□□ 0.31
APP-202ENST00000348990 P2RY14Q15391 338 aa17■□□□□ 0.31
APP-202ENST00000348990 CHST9Q7L1S5 443 aa17■□□□□ 0.31
APP-202ENST00000348990 OR52N2Q8NGI0 321 aa17■□□□□ 0.31
APP-202ENST00000348990 LRR1Q96L50 414 aa17■□□□□ 0.31
APP-202ENST00000348990 TMED9Q9BVK6 235 aa17■□□□□ 0.31
APP-202ENST00000348990 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
APP-202ENST00000348990 ZDHHC6Q9H6R6 413 aa17■□□□□ 0.31
APP-202ENST00000348990 GBF1Q92538 1859 aa17■□□□□ 0.31
APP-202ENST00000348990 OTOFQ9HC10 1997 aa16.99■□□□□ 0.31
APP-202ENST00000348990 A0A1W2PRB8 838 aa16.99■□□□□ 0.31
APP-202ENST00000348990 TMEM88BA6NKF7 163 aa16.99■□□□□ 0.31
APP-202ENST00000348990 ADAM12O43184 909 aa16.99■□□□□ 0.31
APP-202ENST00000348990 LYRM1O43325 122 aa16.99■□□□□ 0.31
APP-202ENST00000348990 ORC5O43913 435 aa16.99■□□□□ 0.31
APP-202ENST00000348990 ALAS2P22557 587 aa16.99■□□□□ 0.31
APP-202ENST00000348990 CEACAM20Q6UY09 585 aa16.99■□□□□ 0.31
APP-202ENST00000348990 LINC00597Q9H2U6 94 aa16.99■□□□□ 0.31
APP-202ENST00000348990 INMT-MINDY4F8WBC2 141 aa16.99■□□□□ 0.31
APP-202ENST00000348990 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
APP-202ENST00000348990 IGSF6O95976 241 aa16.99■□□□□ 0.31
APP-202ENST00000348990 NAT1P18440 290 aa16.99■□□□□ 0.31
APP-202ENST00000348990 CPN2P22792 545 aa16.99■□□□□ 0.31
APP-202ENST00000348990 TIA1P31483 386 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■□□ 16.1
APP-202ENST00000348990 PLCZ1Q86YW0 608 aa16.99■□□□□ 0.31
APP-202ENST00000348990 RBM45Q8IUH3 476 aaKnown RBP16.99■□□□□ 0.31
APP-202ENST00000348990 OXR1Q8N573 874 aa16.99■□□□□ 0.31
APP-202ENST00000348990 C2orf73Q8N5S3 287 aaPredicted RBP16.99■□□□□ 0.31
APP-202ENST00000348990 LRRC20Q8TCA0 184 aa16.99■□□□□ 0.31
APP-202ENST00000348990 TMEM159Q96B96 161 aa16.99■□□□□ 0.31
APP-202ENST00000348990 TMEM245Q9H330 911 aa16.99■□□□□ 0.31
APP-202ENST00000348990 REEP4Q9H6H4 257 aa16.99■□□□□ 0.31
APP-202ENST00000348990 PCDHB7Q9Y5E2 793 aa16.99■□□□□ 0.31
APP-202ENST00000348990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.98■□□□□ 0.31
APP-202ENST00000348990 IQCMA0A1B0GVH7 501 aa16.98■□□□□ 0.31
APP-202ENST00000348990 WASHC1A8K0Z3 465 aa16.98■□□□□ 0.31
APP-202ENST00000348990 I3L521 148 aa16.98■□□□□ 0.31
APP-202ENST00000348990 NME6O75414 186 aaPredicted RBP16.98■□□□□ 0.31
APP-202ENST00000348990 CELF2O95319 508 aaKnown RBP16.98■□□□□ 0.31
APP-202ENST00000348990 IGHA2P01877 340 aa16.98■□□□□ 0.31
APP-202ENST00000348990 KLK1P06870 262 aa16.98■□□□□ 0.31
APP-202ENST00000348990 RTN4RL1Q86UN2 441 aaPredicted RBP16.98■□□□□ 0.31
APP-202ENST00000348990 LHFPL3Q86UP9 236 aa16.98■□□□□ 0.31
APP-202ENST00000348990 PROKR2Q8NFJ6 384 aa16.98■□□□□ 0.31
APP-202ENST00000348990 OR8J1Q8NGP2 316 aa16.98■□□□□ 0.31
APP-202ENST00000348990 QRFPRQ96P65 431 aa16.98■□□□□ 0.31
APP-202ENST00000348990 NLNQ9BYT8 704 aa16.98■□□□□ 0.31
APP-202ENST00000348990 GPR52Q9Y2T5 361 aa16.98■□□□□ 0.31
APP-202ENST00000348990 A0A1B0GVC2 190 aa16.98■□□□□ 0.31
APP-202ENST00000348990 A6NIN4 97 aa16.98■□□□□ 0.31
APP-202ENST00000348990 DPM1O60762 260 aa16.98■□□□□ 0.31
APP-202ENST00000348990 ATP1B2P14415 290 aaPredicted RBP16.98■□□□□ 0.31
APP-202ENST00000348990 PRPH2P23942 346 aa16.98■□□□□ 0.31
APP-202ENST00000348990 HOXC8P31273 242 aa16.98■□□□□ 0.31
APP-202ENST00000348990 STK19P49842 368 aaPredicted RBP16.98■□□□□ 0.31
APP-202ENST00000348990 AP1S2P56377 157 aa16.98■□□□□ 0.31
APP-202ENST00000348990 LRRC32Q14392 662 aa16.98■□□□□ 0.31
APP-202ENST00000348990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.98■□□□□ 0.313e-7■■■□□ 14.7
APP-202ENST00000348990 GLYR1Q49A26 553 aaPredicted RBP16.98■□□□□ 0.31
APP-202ENST00000348990 TOR1AIP1Q5JTV8 583 aa16.98■□□□□ 0.31
APP-202ENST00000348990 FUT10Q6P4F1 479 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms