RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SIX3O95343 332 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 NR2C1P13056 603 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 NFKB2Q00653 900 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC25A25Q6KCM7 469 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF704Q6ZNC4 412 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 GPR151Q8TDV0 419 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 EBF4Q9BQW3 602 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SLAMF7Q9NQ25 335 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ALPPL2P10696 532 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 GKP32189 559 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ASTE1Q2TB18 679 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 CDNFQ49AH0 187 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC9B1Q4ZJI4 515 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 Q8N402 240 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 C11orf65Q8NCR3 313 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ZFP3Q96NJ6 502 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF251Q9BRH9 671 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 TLR9Q9NR96 1032 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 BHMG1C9JSJ3 638 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 FGF18O76093 207 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 MAP2K4P45985 399 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 PRR5P85299 388 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 HMGCS1Q01581 520 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 AANATQ16613 207 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 DCAF12L1Q5VU92 463 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 TMC8Q8IU68 726 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 TMEM145Q8NBT3 493 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC35G5Q96KT7 338 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SEC22CQ9BRL7 303 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 GRID2O43424 1007 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SCGB1D1O95968 90 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 TMEM11P17152 192 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 RPS19P39019 145 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 MLLT3P42568 568 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 GANABQ14697 944 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 HEPACAMQ14CZ8 416 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 GPR19Q15760 415 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 OR5AK3PQ8NH89 298 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 MFSD8Q8NHS3 518 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ACOT11Q8WXI4 607 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 COL21A1Q96P44 957 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 FCRL5Q96RD9 977 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 EIF5A2Q9GZV4 153 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 VRTNQ9H8Y1 702 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 NID2Q14112 1375 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 CXorf49A8MYA2 514 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 TGOLN2O43493 480 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 PAX6P26367 422 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 SLBPQ14493 270 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF792Q3KQV3 632 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 FRRS1Q6ZNA5 592 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF367Q7RTV3 350 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 FAM124BQ9H5Z6 455 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 ADAP2Q9NPF8 381 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 EIF2B3Q9NR50 452 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 COQ4Q9Y3A0 265 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 KCTD3Q9Y597 815 aa10.68□□□□□ -0.7
SMARCE1-202ENST00000348513 CLCNKAP51800 687 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 RPS14P62263 151 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 UBAP2Q5T6F2 1119 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 KIAA0930Q6ICG6 404 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 NCEH1Q6PIU2 408 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 SNX29P2Q8IUI4 249 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 WFIKKN2Q8TEU8 576 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 SNX33Q8WV41 574 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 DCAKDQ8WVC6 231 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 CST11Q9H112 138 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 WASHC1A8K0Z3 465 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 PCDH7O60245 1069 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 SNAI1O95863 264 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 GNSP15586 552 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 REEP5Q00765 189 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 RFTN1Q14699 578 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC35G1Q2M3R5 365 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 ATG9BQ674R7 924 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 PIWIL3Q7Z3Z3 882 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 CANT1Q8WVQ1 401 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TM9SF4Q92544 642 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 RNF31Q96EP0 1072 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TAPBPLQ9BX59 468 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 HSD3B7Q9H2F3 369 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 ZDHHC4Q9NPG8 344 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 FBXL12Q9NXK8 326 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 HEBP2Q9Y5Z4 205 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TEX13CA0A0J9YWL9 993 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 RIIAD1A6NNX1 92 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TRAPPC2P0DI81 140 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TRAPPC2BP0DI82 140 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TYRP14679 529 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 BAMBIQ13145 260 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 PHF19Q5T6S3 580 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 CELF5Q8N6W0 485 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 TMBIM1Q969X1 311 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 RDH12Q96NR8 316 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 RAD9AQ99638 391 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF639Q9UID6 485 aa10.67□□□□□ -0.7
SMARCE1-202ENST00000348513 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms