RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 OR2B3O76000 313 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 IGSF6O95976 241 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 C8GP07360 202 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 HSD3B1P14060 373 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 ZNF30P17039 623 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 ALAS2P22557 587 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CBLP22681 906 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 HSD3B2P26439 372 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CD70P32970 193 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 LIMS1P48059 325 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CRISP1P54107 249 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CRISP3P54108 245 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CD83Q01151 205 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 MAB21L1Q13394 359 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 ARHGEF7Q14155 803 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 PTGES3Q15185 160 aaKnown RBP15.16■□□□□ 0.02
HMGA1-202ENST00000347617 RGNQ15493 299 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 DUSP6Q16828 381 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 ARMC12Q5T9G4 340 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 FRG2Q64ET8 278 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 TSEN54Q7Z6J9 526 aaKnown RBP15.16■□□□□ 0.02
HMGA1-202ENST00000347617 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CELF5Q8N6W0 485 aaKnown RBP15.16■□□□□ 0.02
HMGA1-202ENST00000347617 YIPF7Q8N8F6 280 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 UBASH3BQ8TF42 649 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CXorf40BQ96DE9 158 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 MTFMTQ96DP5 389 aaKnown RBP15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CLIP3Q96DZ5 547 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 APIPQ96GX9 242 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 EXOC2Q96KP1 924 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 APOLD1Q96LR9 279 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 FRG2BQ96QU4 278 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 PIP5K1AQ99755 562 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 DUSP26Q9BV47 211 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 TIGARQ9NQ88 270 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 PRDM8Q9NQV8 689 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 SNTG1Q9NSN8 517 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 CLEC4EQ9ULY5 219 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 MRPS23Q9Y3D9 190 aaKnown RBP15.16■□□□□ 0.02
HMGA1-202ENST00000347617 RPL36Q9Y3U8 105 aaKnown RBP15.16■□□□□ 0.02
HMGA1-202ENST00000347617 PCDHGB7Q9Y5F8 929 aa15.16■□□□□ 0.02
HMGA1-202ENST00000347617 C1orf226A1L170 272 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 GRXCR1A8MXD5 290 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SLC43A1O75387 559 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 LRATO95237 230 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SRPRAP08240 638 aaKnown RBP15.15■□□□□ 0.02
HMGA1-202ENST00000347617 CCNYL3P0C7X3 344 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 PRKAR1AP10644 381 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 POLR2CP19387 275 aaPredicted RBP15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SLC9A3P48764 834 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 PTPN5P54829 565 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 CDH12P55289 794 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SNRPD1P62314 119 aaKnown RBP15.15■□□□□ 0.02
HMGA1-202ENST00000347617 PPP3R1P63098 170 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 BCL2L1Q07817 233 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 KCNC3Q14003 757 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SHHQ15465 462 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SAXO2Q658L1 398 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SPRED2Q7Z698 418 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 GALNT10Q86SR1 603 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 OR2AP1Q8NGE2 309 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 CREB3L4Q8TEY5 395 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 PIH1D2Q8WWB5 315 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 HYLS1Q96M11 299 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 CPEB1Q9BZB8 566 aaKnown RBP15.15■□□□□ 0.02
HMGA1-202ENST00000347617 SMG9Q9H0W8 520 aaKnown RBP15.15■□□□□ 0.02
HMGA1-202ENST00000347617 ANKRA2Q9H9E1 313 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 RBFOX1Q9NWB1 397 aaKnown RBP15.15■□□□□ 0.02
HMGA1-202ENST00000347617 PTTG3PQ9NZH4 202 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 ASB4Q9Y574 426 aa15.15■□□□□ 0.02
HMGA1-202ENST00000347617 TMEM229AB2RXF0 380 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 SCAMP2O15127 329 aaKnown RBP15.14■□□□□ 0.01
HMGA1-202ENST00000347617 SLC16A5O15375 505 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 PDPK1O15530 556 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF821O75541 412 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-202ENST00000347617 TSPAN19P0C672 248 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 UBL4AP11441 157 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 JUPP14923 745 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 EPORP19235 508 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 PRKACBP22694 351 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 SDC2P34741 201 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 DAB2P98082 770 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 HSPA14Q0VDF9 509 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 SLC51BQ86UW2 128 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 NANOGP1Q8N7R0 232 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 C19orf18Q8NEA5 215 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 DIRAS2Q96HU8 199 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 NIPSNAP1Q9BPW8 284 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 DPH2Q9BQC3 489 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-202ENST00000347617 ISYNA1Q9NPH2 558 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 DZANK1Q9NVP4 752 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 ARL15Q9NXU5 204 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 PPIL1Q9Y3C6 166 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 SPEF1Q9Y4P9 236 aa15.14■□□□□ 0.01
HMGA1-202ENST00000347617 MKI67P46013 3256 aaKnown RBP15.14■□□□□ 0.01
HMGA1-202ENST00000347617 IRGMA1A4Y4 181 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 LINC00862A6NCI5 91 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 SMAD6O43541 496 aaKnown RBP15.13■□□□□ 0.01
HMGA1-202ENST00000347617 ORC5O43913 435 aa15.13■□□□□ 0.01
HMGA1-202ENST00000347617 TPST2O60704 377 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms