RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PTGR1Q14914 329 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 SPIN4Q56A73 249 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 SHKBP1Q8TBC3 707 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 SLC35B4Q969S0 331 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ERVMER34-1Q9H9K5 563 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 TCRBV5S1A1TA0A578 114 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 TMX2-CTNND1H3BSU7 103 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 MRPS14O60783 128 aaKnown RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 POP7O75817 140 aaKnown RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 CYBAP13498 195 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 LARS2Q15031 903 aaKnown RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 DUOXA1Q1HG43 343 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 VMACQ2NL98 169 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 C22orf42Q6IC83 251 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 TSPAN33Q86UF1 283 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 TSPYL5Q86VY4 417 aaPredicted RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ANKRD53Q8N9V6 530 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 MS4A4AQ96JQ5 239 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 SLC30A3Q99726 388 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 CACNG6Q9BXT2 260 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ZCCHC3Q9NUD5 404 aaKnown RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 PCDHGB5Q9Y5G0 923 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF705EA8MWA4 302 aaPredicted RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 EEF1E1O43324 174 aaKnown RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 TXNL1O43396 289 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 FGF18O76093 207 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 OPN1SWP03999 348 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 SLC10A3P09131 477 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 HNF1BP35680 557 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 CYBRD1Q53TN4 286 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF789Q5FWF6 425 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 PRAMEF14Q5SWL7 426 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 PRAMEF13Q5VWM6 474 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 SLC25A24Q6NUK1 477 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 NCEH1Q6PIU2 408 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 CHCHD4Q8N4Q1 142 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 LSMEM1Q8N8F7 131 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 OR8J3Q8NGG0 315 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 ATP13A2Q9NQ11 1180 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 CD300AQ9UGN4 299 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 POLR1DQ9Y2S0 133 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 C1QTNF8P60827 252 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 PRKCDQ05655 676 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 LRRC26Q2I0M4 334 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 HS3ST5Q8IZT8 346 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 DTX3Q8N9I9 347 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 C1orf216Q8TAB5 229 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 TCTEX1D2Q8WW35 142 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ST8SIA2Q92186 375 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 MUL1Q969V5 352 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ELMOD3Q96FG2 381 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 NECTIN4Q96NY8 510 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 FYTTD1Q96QD9 318 aaKnown RBP14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SLC35A5Q9BS91 424 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF436Q9C0F3 470 aaPredicted RBP14.87□□□□□ -0.03
SRPK1-201ENST00000346162 TPT1P8Q9HAU6 139 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 B3GNT2Q9NY97 397 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 DNAJC27Q9NZQ0 273 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ENTPD6O75354 484 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SLC35G6P0C7Q6 338 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 CDKN2CP42773 168 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 BDKRB1P46663 353 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 DEFA6Q01524 100 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 GRIK2Q13002 908 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SCARB2Q14108 478 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SPHARQ15513 63 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 PAMR1Q6UXH9 720 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 MBOAT1Q6ZNC8 495 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ZSWIM9Q86XI8 627 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SCAMP4Q969E2 229 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 TMEM80Q96HE8 168 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 WASH6PQ9NQA3 447 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 MGAT4CQ9UBM8 478 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 C2orf78A6NCI8 922 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 HLA-DQA2P01906 255 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SRPRAP08240 638 aaKnown RBP14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ADH5P11766 374 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF3P17036 446 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SSTR4P31391 388 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 CLCN4P51793 760 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SLC3A1Q07837 685 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ILF3Q12906 894 aaKnown RBP eCLIP14.87□□□□□ -0.037e-9■■□□□ 14
SRPK1-201ENST00000346162 ZNF648Q5T619 568 aaPredicted RBP14.87□□□□□ -0.03
SRPK1-201ENST00000346162 HES5Q5TA89 166 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF782Q6ZMW2 699 aaPredicted RBP14.87□□□□□ -0.03
SRPK1-201ENST00000346162 SLC35G5Q96KT7 338 aa14.87□□□□□ -0.03
SRPK1-201ENST00000346162 N4BP2Q86UW6 1770 aaPredicted RBP14.87□□□□□ -0.03
SRPK1-201ENST00000346162 LHCGRP22888 699 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 DDX6P26196 483 aaKnown RBP eCLIP14.86□□□□□ -0.032e-12■■■■□ 26.7
SRPK1-201ENST00000346162 SHMT2P34897 504 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 SH3BP2P78314 561 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 TARDBPQ13148 414 aaKnown RBP eCLIP14.86□□□□□ -0.034e-11■■■■■ 38.7
SRPK1-201ENST00000346162 OR4D1Q15615 310 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.86□□□□□ -0.03
SRPK1-201ENST00000346162 GJD3Q8N144 294 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF350Q9GZX5 532 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 GPR83Q9NYM4 423 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 FBXL21Q9UKT6 434 aa14.86□□□□□ -0.03
SRPK1-201ENST00000346162 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms