RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 BMP8AQ7Z5Y6 402 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■■■■■ 278.5
SMARCA4-201ENST00000344626 C11orf16Q9NQ32 467 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 STARD5Q9NSY2 213 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 NOX1Q9Y5S8 564 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 CACNA1EQ15878 2313 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 RGS10O43665 173 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 ARG2P78540 354 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 ISCA2Q86U28 154 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 OR8K5Q8NH50 307 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 WDR60Q8WVS4 1066 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 BIRC7Q96CA5 298 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 MEAF6Q9HAF1 191 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 TREX1Q9NSU2 369 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 TMEM30AQ9NV96 361 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 A0A096LPI6 279 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 IVDP26440 423 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 HTR4Q13639 388 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 CXorf57Q6NSI4 855 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 ADAMTSL4Q6UY14 1074 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 PIANPQ8IYJ0 282 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 CBR4Q8N4T8 237 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 FAM156AQ8NDB6 213 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 LRTOMTQ8WZ04 291 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 SPRTNQ9H040 489 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 TTC28Q96AY4 2481 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 ACOT7O00154 380 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 ARPC2O15144 300 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 BCKDHAP12694 445 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 SHC2P98077 582 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 CEP78Q5JTW2 689 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 TRNP1Q6NT89 227 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 OR51V1Q9H2C8 321 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 RAB26Q9ULW5 256 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 MAN2B2Q9Y2E5 1009 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 NUAK1O60285 661 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 GPR37L1O60883 481 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 P04436 131 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 AOC1P19801 751 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 TCN2P20062 427 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 E2F1Q01094 437 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 RBBP4Q09028 425 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 GRIK2Q13002 908 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 ABRAXAS2Q15018 415 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 OR56A3Q8NH54 315 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 RHBDF1Q96CC6 855 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 CADM1Q9BY67 442 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 TVP23BQ9NYZ1 205 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 MCM8Q9UJA3 840 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 OPN1SWP03999 348 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 UBQLNLQ8IYU4 475 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 TM9SF4Q92544 642 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 PCTPQ9UKL6 214 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 TP73O15350 636 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 SCO2O43819 266 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 PTPRRQ15256 657 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 SMU1Q2TAY7 513 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 COL11A2P13942 1736 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 A0A0A6YYC8 382 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 I3L1I5 382 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 PGRMC2O15173 223 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 IL33O95760 270 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 C9P02748 559 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 MPLP40238 635 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 RSBN1Q5VWQ0 802 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 RFLNAQ6ZTI6 216 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 NLGN4XQ8N0W4 816 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 MFSD2AQ8NA29 543 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 ZNF395Q9H8N7 513 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 BRF2Q9HAW0 419 aa15.67■□□□□ 0.1
SMARCA4-201ENST00000344626 ECM29Q5VYK3 1845 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 hCG_2014768A0A024R1R8 64 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 SERPINA3P01011 423 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 DCDC1P59894 354 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 PPP3R1P63098 170 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 GALNT1Q10472 559 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 ZNF483Q8TF39 744 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 TRNAU1APQ9NX07 287 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 PCDHGB1Q9Y5G3 927 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 ZNF831Q5JPB2 1677 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 MYH7BA7E2Y1 1941 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 ANGPTL1O95841 491 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 GSK3BP49841 420 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 LPCAT4Q643R3 524 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 LGI4Q8N135 537 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 FRMD1Q8N878 549 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 GATSQ8NAP1 163 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 PYURFQ96I23 114 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 TRIM2Q9C040 744 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 KIAA1551Q9HCM1 1747 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 CEP250Q9BV73 2442 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 HCRTR2O43614 444 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 CPNE3O75131 537 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 IGHEP01854 428 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 TLDC1Q6P9B6 456 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 MCATQ8IVS2 390 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 ZNF440Q8IYI8 595 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 DIO2Q92813 273 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 C1GALT1C1Q96EU7 318 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 IGSF5Q9NSI5 407 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms