RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 ARHGAP19Q14CB8 494 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 MLF2Q15773 248 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-201ENST00000343916 CST6Q15828 149 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 RGS21Q2M5E4 152 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 FAM46CQ5VWP2 391 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SLCO6A1Q86UG4 719 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 NLGN4XQ8N0W4 816 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SVOPQ8N4V2 548 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SMPDL3AQ92484 453 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 FERD3LQ96RJ6 166 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SIGLEC11Q96RL6 698 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 PIP5K1AQ99755 562 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 COPS4Q9BT78 406 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 WDR26Q9H7D7 661 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 WASH6PQ9NQA3 447 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 KCNK6Q9Y257 313 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 ERGIC3Q9Y282 383 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 STON1Q9Y6Q2 735 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 EYSQ5T1H1 3165 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 TMEM221A6NGB7 291 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 PDPK1O15530 556 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 RPN2P04844 631 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 ANXA8P13928 327 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 PUM1Q14671 1186 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL9A3-201ENST00000343916 IRF4Q15306 451 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 ARMC8Q8IUR7 673 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 HDDC3Q8N4P3 179 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 INSM2Q96T92 566 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-201ENST00000343916 MACROD1Q9BQ69 325 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 NEURL2Q9BR09 285 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 IGFLR1Q9H665 355 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 PELI2Q9HAT8 420 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 IMP3Q9NV31 184 aaKnown RBP18.41■□□□□ 0.54
COL9A3-201ENST00000343916 FAM32AQ9Y421 112 aaKnown RBP18.41■□□□□ 0.54
COL9A3-201ENST00000343916 PLEKHM1Q9Y4G2 1056 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 SPTBN5Q9NRC6 3674 aaKnown RBP18.41■□□□□ 0.54
COL9A3-201ENST00000343916 SEMA3DO95025 777 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 GADD45GO95257 159 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 IDUAP35475 653 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 RAB15P59190 212 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 ELOAQ14241 798 aaKnown RBP18.41■□□□□ 0.54
COL9A3-201ENST00000343916 HEPACAMQ14CZ8 416 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 SYT16Q17RD7 645 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 TMEM236Q5W0B7 351 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 REEP3Q6NUK4 255 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 PDXPQ96GD0 296 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 MCOLN1Q9GZU1 580 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 SFXN1Q9H9B4 322 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 SPATA7Q9P0W8 599 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 POFUT2Q9Y2G5 429 aa18.41■□□□□ 0.54
COL9A3-201ENST00000343916 IGKV1-8A0A0C4DH67 115 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 OR2A25A4D2G3 310 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 KMOO15229 486 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 SH3BP5O60239 455 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 ADAM23O75077 832 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 IFNA14P01570 189 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 CDH3P22223 829 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 CXCR2P25025 360 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 LIM2P55344 173 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 REEP5Q00765 189 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 C2orf27AQ580R0 203 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 SAXO2Q658L1 398 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 SZRD1Q7Z422 152 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 UBE3DQ7Z6J8 389 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 TMCO5AQ8N6Q1 288 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 PHF10Q8WUB8 498 aaKnown RBP18.4■□□□□ 0.54
COL9A3-201ENST00000343916 IPCEF1Q8WWN9 437 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-201ENST00000343916 TMEM19Q96HH6 336 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 TEX101Q9BY14 249 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 ZFR2Q9UPR6 939 aaKnown RBP18.4■□□□□ 0.54
COL9A3-201ENST00000343916 M0R3G1 203 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 PRKRAO75569 313 aaKnown RBP18.4■□□□□ 0.54
COL9A3-201ENST00000343916 PTGER1P34995 402 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 CD300CQ08708 224 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 PAGE2Q7Z2X7 111 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 ZNF605Q86T29 641 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 RHOXF1Q8NHV9 184 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 NEURL3Q96EH8 262 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 SH3YL1Q96HL8 342 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-201ENST00000343916 KXD1Q9BQD3 176 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 SIRT3Q9NTG7 399 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-201ENST00000343916 GPR83Q9NYM4 423 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 ZNF226Q9NYT6 803 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 PCDHGA4Q9Y5G9 962 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 ENPP4Q9Y6X5 453 aa18.4■□□□□ 0.54
COL9A3-201ENST00000343916 OR52A4PA6NMU1 304 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 FFAR1O14842 300 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 SLC22A1O15245 554 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 NDUFS4O43181 175 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 HOXB3P14651 431 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-201ENST00000343916 CD36P16671 472 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 LIMS1P48059 325 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 SOX9P48436 509 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 CSNK1G2P78368 415 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 TP53BP2Q13625 1128 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 SPDYE7PQ495Y7 208 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 NIPAL1Q6NVV3 410 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 NUDT13Q86X67 352 aa18.39■□□□□ 0.53
COL9A3-201ENST00000343916 AQP11Q8NBQ7 271 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms