RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GALNT9Q9HCQ5 603 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 NLKQ9UBE8 527 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 TESQ9UGI8 421 aaKnown RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CRLS1Q9UJA2 301 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 HCN2Q9UL51 889 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CLCA3PQ9Y6N3 262 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 RNF215Q9Y6U7 377 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 PCNTO95613 3336 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 GLYATL1P3A0A0U1RQE8 302 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 A0A1B0GVM2 712 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 HEPACAM2A8MVW5 462 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 UPK3BL1B0FP48 263 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 UPK3BL2E5RIL1 263 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 B4GALT3O60512 393 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 RAB36O95755 333 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TPOP07202 933 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 BPIP17213 487 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 DDX5P17844 614 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 CRATP43155 626 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TUFMP49411 452 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 EVX1P49640 407 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SGSHP51688 502 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 GAS1P54826 345 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 WDR5P61964 334 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 RIPPLY1Q0D2K3 151 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 MRPL28Q13084 256 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 CHRNA6Q15825 494 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 PRAMEF19Q5SWL8 479 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ARMC12Q5T9G4 340 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TEX261Q6UWH6 196 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM107Q6UX40 140 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 UBE2J2Q8N2K1 259 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 FAM26EQ8N5C1 309 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 OR52I1Q8NGK6 324 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 OR52P1PQ8NH57 321 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 HUS1BQ8NHY5 278 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 FGF11Q92914 225 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 C17orf62Q9BQA9 187 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 NT5DC2Q9H857 520 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 HEXA-AS1Q9H8Q6 139 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 FOLH1BQ9HBA9 442 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 RC3H2Q9HBD1 1191 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ZFYVE1Q9HBF4 777 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 RAB23Q9ULC3 237 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 MGAT4BQ9UQ53 548 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 EXO1Q9UQ84 846 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 U3KQ87 197 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 VWA8A3KMH1 1905 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TRBC2A0A5B9 178 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM129A0AVI4 362 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 H0YIV9 168 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 FFAR1O14842 300 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 PLOD3O60568 738 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 OR7A10O76100 309 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SRPRAP08240 638 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TNNI3P19429 210 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 CCR7P32248 378 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TALDO1P37837 337 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SPAM1P38567 509 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 NSG1P42857 185 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SLC11A2P49281 568 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 AP1S2P56377 157 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 PFN3P60673 137 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 AP1S1P61966 158 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 RPS25P62851 125 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 CDK6Q00534 326 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF177Q13360 481 aaPredicted RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 DSG2Q14126 1118 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 DUSP6Q16828 381 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF385BQ569K4 471 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ANKRD54Q6NXT1 300 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF783Q6ZMS7 281 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ABI3BPQ7Z7G0 1075 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SLC30A8Q8IWU4 369 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 HJURPQ8NCD3 748 aaPredicted RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 OR8H1Q8NGG4 311 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 UCN3Q969E3 161 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 B3GNT4Q9C0J1 378 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 MRPS18AQ9NVS2 196 aaKnown RBP9.22□□□□□ -0.93
HOXA1-201ENST00000343060 ZSCAN32Q9NX65 697 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 SLC22A14Q9Y267 594 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 PCDHB7Q9Y5E2 793 aa9.22□□□□□ -0.93
HOXA1-201ENST00000343060 TRBV4-1A0A0J9YWV2 114 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 RPS10-NUDT3A0A1W2PQS6 291 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 C7orf66A4D0T2 115 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 C2orf78A6NCI8 922 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 INMT-MINDY4F8WBC2 141 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 GFYI3L273 518 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 CHP2O43745 196 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 IFNW1P05000 195 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 POU1F1P28069 291 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 BMP8BP34820 402 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 AGFG1P52594 562 aaKnown RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 WNT4P56705 351 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 BEX3Q00994 111 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ALDH6A1Q02252 535 aaKnown RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 GANABQ14697 944 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms