RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 RPF2Q9H7B2 306 aaKnown RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 LRTM1Q9HBL6 345 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 SLCO1B3Q9NPD5 702 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 NMRK1Q9NWW6 199 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 MRPS33Q9Y291 106 aaKnown RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 TLN1Q9Y490 2541 aaKnown RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 RGS14O43566 566 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 ERAL1O75616 437 aaKnown RBP12.39□□□□□ -0.43
TUBD1-202ENST00000340993 MYO1DO94832 1006 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 F10P00742 488 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 IL3P08700 152 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 ANXA4P09525 319 aaPredicted RBP12.39□□□□□ -0.43
TUBD1-202ENST00000340993 GRK2P25098 689 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 SERPINB5P36952 375 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 BUD31P41223 144 aaPredicted RBP12.39□□□□□ -0.43
TUBD1-202ENST00000340993 FOLH1Q04609 750 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 Q0VFX4 171 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 PCOLCEQ15113 449 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 LINC00303Q3SY05 128 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 DCAF10Q5QP82 559 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 NDUFAF5Q5TEU4 345 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 VWA5B1Q5TIE3 1220 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 FCRLBQ6BAA4 426 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 PAPD4Q6PIY7 484 aaKnown RBP12.39□□□□□ -0.43
TUBD1-202ENST00000340993 Q6ZSR9 355 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 ZCCHC7Q8N3Z6 543 aaKnown RBP12.39□□□□□ -0.43
TUBD1-202ENST00000340993 CLEC1AQ8NC01 280 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 LRRC8CQ8TDW0 803 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 THAP4Q8WY91 577 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 TUBGCP3Q96CW5 907 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 C19orf60Q96EN9 201 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 PRDM9Q9NQV7 894 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 LYARQ9NX58 379 aaKnown RBP12.39□□□□□ -0.43
TUBD1-202ENST00000340993 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 PHF11Q9UIL8 331 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 DLGAP4Q9Y2H0 992 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 RAP2CQ9Y3L5 183 aa12.39□□□□□ -0.43
TUBD1-202ENST00000340993 IGHV1-45A0A0A0MS14 117 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 GOLGA8QA0A0J9YX86 632 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 GOLGA8OA6NCC3 632 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 GOLGA8NF8WBI6 632 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 K7EM74 188 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 SLC28A1O00337 649 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 CLDN4O14493 209 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 PROM1O43490 865 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 AKAP10O43572 662 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 SCELO95171 688 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 HSD3B1P14060 373 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TNNI3P19429 210 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 HSD3B2P26439 372 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TLX1P31314 330 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TIA1P31483 386 aaKnown RBP eCLIP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 RPL14P50914 215 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 PGDP52209 483 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 BTBD16Q32M84 506 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 SPIN4Q56A73 249 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 C10orf62Q5T681 223 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 ATG16L1Q676U5 607 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 MRM1Q6IN84 353 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 ANKRD26P1Q6NSI1 321 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 QSOX2Q6ZRP7 698 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 KIF2BQ8N4N8 673 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 SIRT6Q8N6T7 355 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 NUDT8Q8WV74 236 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 THOC3Q96J01 351 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TSSK3Q96PN8 268 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 ALOXE3Q9BYJ1 711 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 PFDN4Q9NQP4 134 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 PPT2Q9UMR5 302 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 CCL27Q9Y4X3 112 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 SPTA1P02549 2419 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 LSM1O15116 133 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 IGHEP01854 428 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TACR1P25103 407 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 FEN1P39748 380 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 RFTN2Q52LD8 501 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 NOXRED1Q6NXP6 359 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TMEM205Q6UW68 189 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 SCUBE1Q8IWY4 988 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 ZNF595Q8IYB9 648 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 FDCSPQ8NFU4 85 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 C16orf78Q8WTQ4 265 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 THAP3Q8WTV1 239 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TTC9Q92623 222 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 ANKRD9Q96BM1 317 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 TM4SF18Q96CE8 201 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 EGLN2Q96KS0 407 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 CATSPER2Q96P56 530 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 WDR41Q9HAD4 459 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 THAP1Q9NVV9 213 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 C1orf109Q9NX04 203 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 GPR83Q9NYM4 423 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 HEY2Q9UBP5 337 aa12.38□□□□□ -0.43
TUBD1-202ENST00000340993 C19orf25Q9UFG5 118 aaPredicted RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 G3BP2Q9UN86 482 aaKnown RBP12.38□□□□□ -0.43
TUBD1-202ENST00000340993 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms