RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MTERF1Q99551 399 aaKnown RBP12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 SERPINI1Q99574 410 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 MAPKAP1Q9BPZ7 522 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 TXLNGYQ9BZA5 131 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 CDCP1Q9H5V8 836 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 PNO1Q9NRX1 252 aaKnown RBP12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF358Q9NW07 568 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 LYARQ9NX58 379 aaKnown RBP12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 LRFN1Q9P244 771 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 TRBV11-1A0A0K0K1C0 115 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 TGFBR3LH3BV60 316 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 PLPP1O14494 284 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR7A17O14581 309 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 DYRK3O43781 588 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZFAND5O76080 213 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 OTCP00480 354 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 IFNA16P05015 189 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 GSTA1P08263 222 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 RPS17P08708 135 aaKnown RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 GP1BBP13224 206 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 COX7A2P14406 83 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 GCAP28676 217 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 TPP2P29144 1249 aaPredicted RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 ARL1P40616 181 aaPredicted RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 HLCSP50747 726 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 GPR143P51810 404 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 TDGF1P3P51864 188 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 HNRNPFP52597 415 aaKnown RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 RPS13P62277 151 aaKnown RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 TNFRSF17Q02223 184 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 SLAMF1Q13291 335 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 SLC29A2Q14542 456 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZRSR2Q15696 482 aaKnown RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 FRG2Q64ET8 278 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 GPR180Q86V85 440 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 NUDT13Q86X67 352 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 GPALPP1Q8IXQ4 340 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 KIF2BQ8N4N8 673 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR8K3Q8NH51 312 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 SIGLEC12Q96PQ1 595 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 FRG2BQ96QU4 278 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 PELOQ9BRX2 385 aaKnown RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 ALOXE3Q9BYJ1 711 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 DDX31Q9H8H2 851 aaKnown RBP12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 RNF11Q9Y3C5 154 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 POLEQ07864 2286 aa12.44□□□□□ -0.42
SIRPB3P-201ENST00000340424 ASPDHA6ND91 283 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 WIPF3A6NGB9 483 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 LRRC14BA6NHZ5 514 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 A8MT66 165 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 A8MUA0 341 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 SAP18O00422 153 aaKnown RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 RTCAO00442 366 aaKnown RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 SEMA7AO75326 666 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 SLC25A12O75746 678 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 NEURL1O76050 574 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 SP1P08047 785 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 PER3P56645 1201 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 HERVK_113P63132 956 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 IGLV3-21P80748 117 aaPredicted RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 IFT88Q13099 833 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 TRAF3Q13114 568 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 C4orf17Q53FE4 359 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 TTC19Q6DKK2 380 aaPredicted RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 SLC25A25Q6KCM7 469 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 CYP20A1Q6UW02 462 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 HSDL2Q6YN16 418 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 CLNKQ7Z7G1 428 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR52B6Q8NGF0 335 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF483Q8TF39 744 aaPredicted RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 NCLNQ969V3 563 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 TMEM125Q96AQ2 219 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 ERVK-6Q9BXR3 956 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 ELOVL6Q9H5J4 265 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 RPF2Q9H7B2 306 aaKnown RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 WDR41Q9HAD4 459 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 AHSPQ9NZD4 102 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 FBXW2Q9UKT8 454 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 STK38LQ9Y2H1 464 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 YARS2Q9Y2Z4 477 aaKnown RBP12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 HIVEP3Q5T1R4 2406 aa12.43□□□□□ -0.42
SIRPB3P-201ENST00000340424 A0A0A6YYD5 115 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 A0A1B0GUH1 482 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 C17orf105B2RV13 164 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 NME2P1O60361 137 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 MAN1A2O60476 641 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 SH3BGRLO75368 114 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 STSP08842 583 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 FAM153BP0C7A2 387 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 TNNI3P19429 210 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 NME2P22392 152 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 STT3AP46977 705 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 PLIN5Q00G26 463 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 RBPJQ06330 500 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms