RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CBX3Q13185 183 aa14.05□□□□□ -0.16
RET-201ENST00000340058 RBM48Q5RL73 367 aaKnown RBP14.05□□□□□ -0.16
RET-201ENST00000340058 SHQ1Q6PI26 577 aaKnown RBP14.05□□□□□ -0.16
RET-201ENST00000340058 HACD2Q6Y1H2 254 aa14.05□□□□□ -0.16
RET-201ENST00000340058 Q6ZPB1 254 aaPredicted RBP14.05□□□□□ -0.16
RET-201ENST00000340058 ERI1Q8IV48 349 aaKnown RBP14.05□□□□□ -0.16
RET-201ENST00000340058 IQCF1Q8N6M8 205 aa14.05□□□□□ -0.16
RET-201ENST00000340058 CAMK1GQ96NX5 476 aa14.05□□□□□ -0.16
RET-201ENST00000340058 TMED9Q9BVK6 235 aa14.05□□□□□ -0.16
RET-201ENST00000340058 ZDHHC7Q9NXF8 308 aa14.05□□□□□ -0.16
RET-201ENST00000340058 A0A075B6Q4 140 aa14.04□□□□□ -0.16
RET-201ENST00000340058 BLOC1S5-TXNDC5H3BN57 136 aa14.04□□□□□ -0.16
RET-201ENST00000340058 PRMT3O60678 531 aa14.04□□□□□ -0.16
RET-201ENST00000340058 MRPL3P09001 348 aaKnown RBP14.04□□□□□ -0.16
RET-201ENST00000340058 CERS1P27544 350 aa14.04□□□□□ -0.16
RET-201ENST00000340058 SHMT2P34897 504 aa14.04□□□□□ -0.16
RET-201ENST00000340058 CD300LGQ6UXG3 332 aa14.04□□□□□ -0.16
RET-201ENST00000340058 CXXC5Q7LFL8 322 aaKnown RBP14.04□□□□□ -0.16
RET-201ENST00000340058 SHFQ7M4L6 423 aa14.04□□□□□ -0.16
RET-201ENST00000340058 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.04□□□□□ -0.16
RET-201ENST00000340058 DZANK1Q9NVP4 752 aa14.04□□□□□ -0.16
RET-201ENST00000340058 KRBA1A5PL33 1030 aa14.04□□□□□ -0.16
RET-201ENST00000340058 XKRYO14609 159 aa14.04□□□□□ -0.16
RET-201ENST00000340058 SBK3P0C264 359 aa14.04□□□□□ -0.16
RET-201ENST00000340058 C5AR1P21730 350 aa14.04□□□□□ -0.16
RET-201ENST00000340058 IL12BP29460 328 aa14.04□□□□□ -0.16
RET-201ENST00000340058 CDKN2CP42773 168 aa14.04□□□□□ -0.16
RET-201ENST00000340058 CDK3Q00526 305 aa14.04□□□□□ -0.16
RET-201ENST00000340058 KCNC4Q03721 635 aa14.04□□□□□ -0.16
RET-201ENST00000340058 NPRL3Q12980 569 aa14.04□□□□□ -0.16
RET-201ENST00000340058 TLDC1Q6P9B6 456 aa14.04□□□□□ -0.16
RET-201ENST00000340058 FAM92BQ6ZTR7 304 aa14.04□□□□□ -0.16
RET-201ENST00000340058 ASPGQ86U10 573 aa14.04□□□□□ -0.16
RET-201ENST00000340058 LHFPL3Q86UP9 236 aa14.04□□□□□ -0.16
RET-201ENST00000340058 JAZF1Q86VZ6 243 aa14.04□□□□□ -0.16
RET-201ENST00000340058 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.04□□□□□ -0.16
RET-201ENST00000340058 ANKFN1Q8N957 763 aa14.04□□□□□ -0.16
RET-201ENST00000340058 RPLP0P6Q8NHW5 317 aa14.04□□□□□ -0.16
RET-201ENST00000340058 OR5P2Q8WZ92 322 aa14.04□□□□□ -0.16
RET-201ENST00000340058 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
RET-201ENST00000340058 DGAT2Q96PD7 388 aa14.04□□□□□ -0.16
RET-201ENST00000340058 CPEB1Q9BZB8 566 aaKnown RBP14.04□□□□□ -0.16
RET-201ENST00000340058 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
RET-201ENST00000340058 RIMS3Q9UJD0 308 aa14.04□□□□□ -0.16
RET-201ENST00000340058 EP400Q96L91 3159 aa14.04□□□□□ -0.16
RET-201ENST00000340058 CCDC182A6NF36 153 aa14.04□□□□□ -0.16
RET-201ENST00000340058 PLOD2O00469 737 aa14.04□□□□□ -0.16
RET-201ENST00000340058 ITGB7P26010 798 aa14.04□□□□□ -0.16
RET-201ENST00000340058 TUBB3Q13509 450 aa14.04□□□□□ -0.16
RET-201ENST00000340058 GFOD2Q3B7J2 385 aa14.04□□□□□ -0.16
RET-201ENST00000340058 FAM217AQ8IXS0 508 aa14.04□□□□□ -0.16
RET-201ENST00000340058 SAMD14Q8IZD0 417 aaPredicted RBP14.04□□□□□ -0.16
RET-201ENST00000340058 WDR12Q9GZL7 423 aaKnown RBP14.04□□□□□ -0.16
RET-201ENST00000340058 GPR52Q9Y2T5 361 aa14.04□□□□□ -0.16
RET-201ENST00000340058 RPL36Q9Y3U8 105 aaKnown RBP14.04□□□□□ -0.16
RET-201ENST00000340058 CACNA1EQ15878 2313 aa14.03□□□□□ -0.16
RET-201ENST00000340058 C8BP07358 591 aa14.03□□□□□ -0.16
RET-201ENST00000340058 UQCRC2P22695 453 aa14.03□□□□□ -0.16
RET-201ENST00000340058 SHC2P98077 582 aa14.03□□□□□ -0.16
RET-201ENST00000340058 SLC3A1Q07837 685 aa14.03□□□□□ -0.16
RET-201ENST00000340058 GRHL2Q6ISB3 625 aa14.03□□□□□ -0.16
RET-201ENST00000340058 KLHL6Q8WZ60 621 aa14.03□□□□□ -0.16
RET-201ENST00000340058 ISG20Q96AZ6 181 aaKnown RBP14.03□□□□□ -0.16
RET-201ENST00000340058 APOBEC3BQ9UH17 382 aaKnown RBP14.03□□□□□ -0.16
RET-201ENST00000340058 BMP2P12643 396 aa14.03□□□□□ -0.16
RET-201ENST00000340058 PIK3CBP42338 1070 aa14.03□□□□□ -0.16
RET-201ENST00000340058 GRK6P43250 576 aa14.03□□□□□ -0.16
RET-201ENST00000340058 PHF19Q5T6S3 580 aa14.03□□□□□ -0.16
RET-201ENST00000340058 IRAK1BP1Q5VVH5 260 aa14.03□□□□□ -0.16
RET-201ENST00000340058 ADNP2Q6IQ32 1131 aa14.03□□□□□ -0.16
RET-201ENST00000340058 MZT2AQ6P582 158 aa14.03□□□□□ -0.16
RET-201ENST00000340058 PIGKQ92643 395 aa14.03□□□□□ -0.16
RET-201ENST00000340058 EZH1Q92800 747 aaPredicted RBP14.03□□□□□ -0.16
RET-201ENST00000340058 PTCHD1Q96NR3 888 aa14.03□□□□□ -0.16
RET-201ENST00000340058 TBL1XR1Q9BZK7 514 aa14.03□□□□□ -0.16
RET-201ENST00000340058 ANKMY1Q9P2S6 941 aa14.03□□□□□ -0.16
RET-201ENST00000340058 TBX21Q9UL17 535 aa14.03□□□□□ -0.16
RET-201ENST00000340058 MAU2Q9Y6X3 613 aa14.03□□□□□ -0.16
RET-201ENST00000340058 ANKRD31Q8N7Z5 1873 aa14.03□□□□□ -0.16
RET-201ENST00000340058 COL24A1Q17RW2 1714 aa14.03□□□□□ -0.16
RET-201ENST00000340058 C2orf92A0A1B0GVN3 265 aa14.03□□□□□ -0.16
RET-201ENST00000340058 IDH3BO43837 385 aa14.03□□□□□ -0.16
RET-201ENST00000340058 IMPA1P29218 277 aa14.03□□□□□ -0.16
RET-201ENST00000340058 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
RET-201ENST00000340058 CDH11P55287 796 aa14.03□□□□□ -0.16
RET-201ENST00000340058 RPL6Q02878 288 aaKnown RBP14.03□□□□□ -0.16
RET-201ENST00000340058 RGNQ15493 299 aa14.03□□□□□ -0.16
RET-201ENST00000340058 PLET1Q6UQ28 207 aa14.03□□□□□ -0.16
RET-201ENST00000340058 DPPA4Q7L190 304 aa14.03□□□□□ -0.16
RET-201ENST00000340058 OR51G2Q8NGK0 314 aa14.03□□□□□ -0.16
RET-201ENST00000340058 GATA6Q92908 595 aa14.03□□□□□ -0.16
RET-201ENST00000340058 SLC6A16Q9GZN6 736 aa14.03□□□□□ -0.16
RET-201ENST00000340058 POLE4Q9NR33 117 aa14.03□□□□□ -0.16
RET-201ENST00000340058 SARDHQ9UL12 918 aa14.03□□□□□ -0.16
RET-201ENST00000340058 NPIPA5A0A0B4J1W7 369 aa14.02□□□□□ -0.16
RET-201ENST00000340058 A0A1W2PPK0 400 aa14.02□□□□□ -0.16
RET-201ENST00000340058 ELOA3DA6NLF2 546 aaPredicted RBP14.02□□□□□ -0.16
RET-201ENST00000340058 PRRT4C9JH25 899 aa14.02□□□□□ -0.16
RET-201ENST00000340058 NPIPA7E9PJI5 369 aa14.02□□□□□ -0.16
RET-201ENST00000340058 TAPBPO15533 448 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms