RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 A0A096LPI6 279 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 P2RX1P51575 399 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 CARD17Q5XLA6 110 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ERN2Q76MJ5 926 aaKnown RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 SCML4Q8N228 414 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 OR1S1Q8NH92 325 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 DNAJB8Q8NHS0 232 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ELMOD3Q96FG2 381 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 EFCAB11Q9BUY7 163 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 IL21RQ9HBE5 538 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 AKAP6Q13023 2319 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 CREG1O75629 220 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ATE1O95260 518 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 GLUD1P00367 558 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ADH1AP07327 375 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 LASP1Q14847 261 aaKnown RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 SPIN4Q56A73 249 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 AMZ2Q86W34 360 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 PELOQ9BRX2 385 aaKnown RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 MROQ9BYG7 248 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ACTR10Q9NZ32 417 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 GLTPQ9NZD2 209 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 LDB2O43679 373 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 AIF1P55008 147 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 LRRC32Q14392 662 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 DPY19L1Q2PZI1 675 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ZNF355PQ9NSJ1 428 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ACTR3BQ9P1U1 418 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 APC2O95996 2303 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 H7C1Q1 480 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 DGKGP49619 791 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SEMG2Q02383 582 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SFRP4Q6FHJ7 346 aaPredicted RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 FNDC8Q8TC99 324 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 TXNL4BQ9NX01 149 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 NLKQ9UBE8 527 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 RPH3ALQ9UNE2 315 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SNAPINO95295 136 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 PROS1P07225 676 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 TMEM119Q4V9L6 283 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 NDUFAF5Q5TEU4 345 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 MAP4K3Q8IVH8 894 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ZNF695Q8IW36 515 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SERPINA12Q8IW75 414 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 UEVLDQ8IX04 471 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 RBM12BQ8IXT5 1001 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 FAM118AQ9NWS6 357 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 C17orf113A0A1B0GUU1 675 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 UCHL1P09936 223 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 PEA15Q15121 130 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 GID4Q8IVV7 300 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 TTLQ8NG68 377 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 CNTN3Q9P232 1028 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 CNOT11Q9UKZ1 510 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 C20orf202A1L168 122 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ALDOBP05062 364 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 PIGFQ07326 219 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SGCAQ16586 387 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 CCNL2Q96S94 520 aaPredicted RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 ABHD16BQ9H3Z7 469 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ASB6Q9NWX5 421 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 OR6C2Q9NZP2 312 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 INSIG1O15503 277 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 CLDN11O75508 207 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 AMY2AP04746 511 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 KCNC4Q03721 635 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 EEF1DP3Q658K8 133 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 SMYD5Q6GMV2 418 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ZNF585AQ6P3V2 769 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 OR10T2Q8NGX3 314 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ALG3Q92685 438 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 UROC1Q96N76 676 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 ZNF559Q9BR84 538 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 PAPOLGQ9BWT3 736 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 CRTAC1Q9NQ79 661 aa12.37□□□□□ -0.43
USP47-202ENST00000339865 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
USP47-202ENST00000339865 KIAA0513O60268 411 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SLC2A1P11166 492 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 VIPR1P32241 457 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SLBPQ14493 270 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP47-202ENST00000339865 ESCO2Q56NI9 601 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 HES5Q5TA89 166 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 STRADAQ7RTN6 431 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SYT3Q9BQG1 590 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 SLC38A1Q9H2H9 487 aa12.36□□□□□ -0.43
USP47-202ENST00000339865 MGAT4BQ9UQ53 548 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms