RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 RFTN1Q14699 578 aaPredicted RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 LY6G5CQ5SRR4 150 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 VHLLQ6RSH7 139 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 CLEC20AQ6ZU45 233 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 TMPRSS12Q86WS5 348 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 OR2AP1Q8NGE2 309 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 OR56A1Q8NGH5 318 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 FBXL8Q96CD0 374 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 EFCAB11Q9BUY7 163 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 ACTL8Q9H568 366 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 PDE7BQ9NP56 450 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 TUBG2Q9NRH3 451 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 KCTD3Q9Y597 815 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 A0A0G2JMP0 313 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 P04436 131 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 SFTPDP35247 375 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 AGTR2P50052 363 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 YTHDF3Q7Z739 585 aaKnown RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 ANKK1Q8NFD2 765 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 OR4M2Q8NGB6 313 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 DIO2Q92813 273 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 ACDQ96AP0 544 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 METTL2AQ96IZ6 378 aaKnown RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 P2RY13Q9BPV8 354 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 C7orf50Q9BRJ6 194 aaKnown RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 TMEM184CQ9NVA4 438 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 RNF215Q9Y6U7 377 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 CLCA1A8K7I4 914 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 F5H0A9 414 aaPredicted RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 ARVCFO00192 962 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 MAP2K7O14733 419 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 PEPDP12955 493 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 NFE2L1Q14494 772 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 PTCHD3Q3KNS1 767 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 LIPKQ5VXJ0 399 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 FAM180BQ6P0A1 224 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 KCNN1Q92952 543 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 TPSD1Q9BZJ3 242 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 PCDHB10Q9UN67 800 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 CASC3O15234 703 aaKnown RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 RPS3P23396 243 aaKnown RBP eCLIP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 OXTRP30559 389 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 NR4A2P43354 598 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 TMEM115Q12893 351 aaPredicted RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 CNKSR3Q6P9H4 555 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 RNF111Q6ZNA4 994 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 OR4N5Q8IXE1 308 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 TMEM234Q8WY98 164 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 FRZBQ92765 325 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 KATNBL1Q9H079 304 aa11.33□□□□□ -0.6
SHANK2-201ENST00000338508 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
SHANK2-201ENST00000338508 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 HCRTO43612 131 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 YES1P07947 543 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 AK4P27144 223 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 MAPK3P27361 379 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 TMEM236Q5W0B7 351 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 KCNIP1Q9NZI2 227 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 COL20A1Q9P218 1284 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 ACAD8Q9UKU7 415 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 EDARQ9UNE0 448 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 LEFTY2O00292 366 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 THBS2P35442 1172 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 SSTP61278 116 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 MOGSQ13724 837 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 EEF1A1P5Q5VTE0 462 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 GLT8D1Q68CQ7 371 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 NUP43Q8NFH3 380 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 PEX11GQ96HA9 241 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 NAA11Q9BSU3 229 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 CADM1Q9BY67 442 aaKnown RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 MROQ9BYG7 248 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 HMX3A6NHT5 357 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 ANKRD66B4E2M5 251 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 SLC1A7O00341 560 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 FLRT2O43155 660 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 CREB1P16220 341 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 GJA5P36382 358 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 TBRG1Q3YBR2 411 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 TPGS2Q68CL5 300 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 ZDHHC1Q8WTX9 485 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 RNF38Q9H0F5 515 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 A8MVJ9 347 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 LATO43561 262 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
SHANK2-201ENST00000338508 ADH1BP00325 375 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 FESP07332 822 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 PET100P0DJ07 73 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 NPRL3Q12980 569 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 CYBRD1Q53TN4 286 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 SHISA6Q6ZSJ9 500 aa11.32□□□□□ -0.6
SHANK2-201ENST00000338508 PIP5K1AQ99755 562 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms