RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ATG4BQ9Y4P1 393 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 FBN2P35556 2912 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A088AWK7 358 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A096LPK6 155 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A1W2PS29 197 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 GLOD5A6NK44 160 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 FAM166BA8MTA8 275 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 KLRC4-KLRK1H3BQV0 150 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 EEDO75530 441 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 EPB42P16452 691 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF10P21506 573 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 GSTM2P28161 218 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 STX2P32856 288 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 HNRNPH2P55795 449 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 KHDRBS2Q5VWX1 349 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 XKRXQ6PP77 449 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 HSDL2Q6YN16 418 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 BNC2Q6ZN30 1099 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 CEP128Q6ZU80 1094 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 CHSY3Q70JA7 882 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF572Q7Z3I7 529 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 RPRMLQ8N4K4 120 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 SLC2A12Q8TD20 617 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF721Q8TF20 911 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 SENP5Q96HI0 755 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 CDK15Q96Q40 435 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 PHACTR1Q9C0D0 580 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 VPS11Q9H270 941 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 SEMA4BQ9NPR2 832 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 KLF13Q9Y2Y9 288 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 KLF2Q9Y5W3 355 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 NCOA6Q14686 2063 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 PKDREJQ9NTG1 2253 aa12.4□□□□□ -0.42
NUDCD3-201ENST00000338427 A8MVJ9 347 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 PLPP1O14494 284 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TFECO14948 347 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 URI1O94763 535 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 MLYCDO95822 493 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 GBAP04062 536 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ALDOAP04075 364 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TPOP07202 933 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 GFAPP14136 432 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 PTGS2P35354 604 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 SSR2P43308 183 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 RNF4P78317 190 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 PCDH1Q08174 1060 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TGM3Q08188 693 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ASPHQ12797 758 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ILF2Q12905 390 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 SETDB1Q15047 1291 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TERF2Q15554 542 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 CPSF6Q16630 551 aaKnown RBP eCLIP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 EMC4Q5J8M3 183 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 GRHL2Q6ISB3 625 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 RPS27LQ71UM5 84 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 GOLGA7Q7Z5G4 137 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 MARVELD2Q8N4S9 558 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ZFP62Q8NB50 900 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 MORN4Q8NDC4 146 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 PSD4Q8NDX1 1056 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 OR2M7Q8NG81 312 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 UBTD2Q8WUN7 234 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ASB15Q8WXK1 588 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 RGMAQ96B86 450 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 CMTM7Q96FZ5 175 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 SCYL1Q96KG9 808 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 DMRTA2Q96SC8 542 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TIMMDC1Q9NPL8 285 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 HPF1Q9NWY4 346 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 TNFRSF10DQ9UBN6 386 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ANGPTL3Q9Y5C1 460 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 APCP25054 2843 aa12.39□□□□□ -0.43
NUDCD3-201ENST00000338427 ZNF407Q9C0G0 2248 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 A0A087X1B8 175 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 A0A1W2PR48 441 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 PRRG2O14669 202 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 TMPRSS11DO60235 418 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 KLHL2O95198 593 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 CLDN14O95500 239 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 TYK2P29597 1187 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 BSGP35613 385 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 DNASE1L1P49184 302 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 SMSP52788 366 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 KRTAP10-9P60411 292 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 FOLH1Q04609 750 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 GTF2H2Q13888 395 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 TMEM35AQ53FP2 167 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 GTF2H2CQ6P1K8 395 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 MTFR2Q6P444 385 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 RPTNQ6XPR3 784 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 GPR180Q86V85 440 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 NOA1Q8NC60 698 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 SRFBP1Q8NEF9 429 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 FAM57AQ8TBR7 257 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms