RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SOX11P35716 441 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MANFP55145 182 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PCBP4P57723 403 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SPEM2Q0P670 501 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GAB1Q13480 694 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FLOT2Q14254 428 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLC48A1Q6P1K1 146 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CA13Q8N1Q1 262 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RCBTB1Q8NDN9 531 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PRSS33Q8NF86 280 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR10A6Q8NH74 314 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GOT1L1Q8NHS2 421 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ASB9Q96DX5 294 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PHF12Q96QT6 1004 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 KCTD14Q9BQ13 255 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RXFP3Q9NSD7 469 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MS4A12Q9NXJ0 267 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TAS2R9Q9NYW1 312 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF282Q9UDV7 671 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 EGFL7Q9UHF1 273 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SPEGQ15772 3267 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ASCC3Q8N3C0 2202 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FITM1A5D6W6 292 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 H3BMH7 237 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 AGRPO00253 132 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DNAJA2O60884 412 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR2B3O76000 313 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZCCHC18P0CG32 403 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TLX1P31314 330 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FRKP42685 505 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLC14A1Q13336 389 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CCNIQ14094 377 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FAM53BQ14153 422 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GRM7Q14831 915 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF750Q32MQ0 723 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SPATS1Q496A3 300 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GARNL3Q5VVW2 1013 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF551Q7Z340 670 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ARHGAP22Q7Z5H3 698 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TTC29Q8NA56 475 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR1L3Q8NH93 324 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR5P2Q8WZ92 322 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CCDC74BQ96LY2 380 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF583Q96ND8 569 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 BBS4Q96RK4 519 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NPLQ9BXD5 320 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RPF2Q9H7B2 306 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TPT1P8Q9HAU6 139 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PDP2Q9P2J9 529 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CLCA2Q9UQC9 943 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 A0A1W2PS29 197 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 EVPLLA8MZ36 301 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 BCAS2O75934 225 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ATP6V1G2O95670 118 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ANKRD34CP0C6C1 535 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 C8orf89P0DMQ9 161 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SIM1P81133 766 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SHC2P98077 582 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HSPB3Q12988 150 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RIPK1Q13546 671 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 C10orf111Q8N326 155 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PNPT1Q8TCS8 783 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZFP90Q8TF47 636 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CNRIP1Q96F85 164 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 EDEM2Q9BV94 578 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 KAT8Q9H7Z6 458 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ACSS1Q9NUB1 689 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FTSJ1Q9UET6 329 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SPACA6W5XKT8 324 aa13.92□□□□□ -0.18
CDK5RAP3-201ENST00000338399 COL5A1P20908 1838 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CHST10O43529 356 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NSA2O95478 260 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NTRK1P04629 796 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CD59P13987 128 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NTSP30990 170 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SOAT1P35610 550 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FEN1P39748 380 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR4D2P58180 307 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SKP1P63208 163 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DUSP2Q05923 314 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TRAP1Q12931 704 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 BNIP2Q12982 314 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SPIDRQ14159 915 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PRAMEF17Q5VTA0 474 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 METTL27Q8N6F8 245 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TRIML2Q8N7C3 387 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR5AK3PQ8NH89 298 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF501Q96CX3 271 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MMABQ96EY8 250 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 AMDHD1Q96NU7 426 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLC35A5Q9BS91 424 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TRIM4Q9C037 500 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RASSF4Q9H2L5 321 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GLIPR2Q9H4G4 154 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CXorf36Q9H7Y0 433 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms