RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZFAND2BQ8WV99 257 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ECHDC3Q96DC8 303 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PCDHA9Q9Y5H5 950 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 OR6C74A6NCV1 312 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 LILRB3O75022 631 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 VSX2P58304 361 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 EIPR1Q53HC9 387 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SERPINA11Q86U17 422 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PRSS58Q8IYP2 241 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF671Q8TAW3 534 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 LMX1AQ8TE12 382 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PIP5K1AQ99755 562 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZSCAN32Q9NX65 697 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 MAGED1Q9Y5V3 778 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TRBV5-4A0A0C4DH59 114 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 C2orf74A8MZ97 194 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 RNASET2O00584 256 aaKnown RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PGDP52209 483 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 WSCD2Q2TBF2 565 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 METTL21AQ8WXB1 218 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ARMC5Q96C12 935 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 COX4I2Q96KJ9 171 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF300Q96RE9 604 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 UBAP1Q9NZ09 502 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 N6AMT1Q9Y5N5 214 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 MYOGP15173 224 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF182P17025 639 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SELENOWP63302 87 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CDK3Q00526 305 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 FCHO2Q0JRZ9 810 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 UAP1L1Q3KQV9 507 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ASTLQ6HA08 431 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PNCKQ6P2M8 343 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 IQCHQ86VS3 1027 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF420Q8TAQ5 688 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.01□□□□□ -1.456e-8■■■□□ 19.1
PRKDC-202ENST00000338368 PHF12Q96QT6 1004 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CPPED1Q9BRF8 314 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TSSK6Q9BXA6 273 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CDC14AQ9UNH5 594 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 NEU3Q9UQ49 428 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CLCA3PQ9Y6N3 262 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CHD5Q8TDI0 1954 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TDRD6O60522 2096 aaKnown RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TLX2O43763 284 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 HMGN2P05204 90 aaKnown RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SIM1P81133 766 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SLC5A12Q1EHB4 618 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 OR52E1Q8NGJ3 308 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ENKURQ8TC29 256 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 NUDT8Q8WV74 236 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 INSM2Q96T92 566 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CFHR5Q9BXR6 569 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 C8orf33Q9H7E9 229 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 IL21RQ9HBE5 538 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ETAA1Q9NY74 926 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PCDHGA8Q9Y5G5 932 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SLCO2B1O94956 709 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 IL12AP29459 219 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SLC36A3Q495N2 470 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 FAM131AQ6UXB0 335 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 UHRF1Q96T88 793 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 DMRT3Q9NQL9 472 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PCDH10Q9P2E7 1040 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 HSPE1-MOB4S4R3N1 261 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SLC5A10A0PJK1 596 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 OLFM2O95897 454 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CD72P21854 359 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 EIF4EBP2Q13542 120 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 EXOC3L2Q2M3D2 409 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 BBS10Q8TAM1 723 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 EID2BQ96D98 161 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 FCRL4Q96PJ5 515 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 RMI1Q9H9A7 625 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PRSS16Q9NQE7 514 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 GIN1Q9NXP7 522 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 THAP10Q9P2Z0 257 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ARFGEF1Q9Y6D6 1849 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 LRRC37AA6NMS7 1700 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PLOD2O00469 737 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CHST10O43529 356 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 B4GALT2O60909 372 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CSTF2P33240 577 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SEPHS1P49903 392 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 GPR149Q86SP6 731 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TSPYL5Q86VY4 417 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CHERPQ8IWX8 916 aaKnown RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 OR4N5Q8IXE1 308 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF548Q8NEK5 533 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TEX37Q96LM6 180 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SCML1Q9UN30 329 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF821O75541 412 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 MYL9P24844 172 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 SMSP52788 366 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PSMD4P55036 377 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 CTBSQ01459 385 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 MLLT1Q03111 559 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 ZC3H14Q6PJT7 736 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms