RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RPS6KB2Q9UBS0 482 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 REM1O75628 298 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 GIFP27352 417 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 CAPZA2P47755 286 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 PITPNAQ00169 270 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 FRRS1Q6ZNA5 592 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 NAGSQ8N159 534 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 UBXN10Q96LJ8 280 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 OR51B5Q9H339 312 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 DUSP21Q9H596 190 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 FAM120CQ9NX05 1096 aaKnown RBP12.71□□□□□ -0.38
COL2A1-201ENST00000337299 PSORS1C1Q9UIG5 152 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 DLGAP4Q9Y2H0 992 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 A0A0D9SEW6 157 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 TRIM3O75382 744 aaPredicted RBP12.71□□□□□ -0.38
COL2A1-201ENST00000337299 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.38
COL2A1-201ENST00000337299 HK1P19367 917 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 FBXW4P57775 412 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 FAM198BQ6UWH4 519 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 MOSPD2Q8NHP6 518 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 KCNJ9Q92806 393 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 DUS3LQ96G46 650 aaKnown RBP12.71□□□□□ -0.38
COL2A1-201ENST00000337299 C2orf49Q9BVC5 232 aaPredicted RBP12.71□□□□□ -0.38
COL2A1-201ENST00000337299 ARHGAP39Q9C0H5 1083 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 CHMP1AQ9HD42 196 aaPredicted RBP12.71□□□□□ -0.38
COL2A1-201ENST00000337299 MGAT4BQ9UQ53 548 aa12.71□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 I6L893 689 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TOR1AO14656 332 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ACVR1BP36896 505 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 DGKGP49619 791 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 OC90Q02509 493 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 PLD1Q13393 1074 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 UGT3A2Q3SY77 523 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 HECTD3Q5T447 861 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 PIGXQ8TBF5 258 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 APIPQ96GX9 242 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 PIP5K1AQ99755 562 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TAS2R10Q9NYW0 307 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ACTL7AQ9Y615 435 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TPPPO94811 219 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TFP02787 698 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 CLDN8P56748 225 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 SOX4Q06945 474 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 CRHR2Q13324 411 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 BCDIN3DQ7Z5W3 292 aaKnown RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TBC1D19Q8N5T2 526 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ISL2Q96A47 359 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TMEM185BQ9H7F4 350 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 MCCC2Q9HCC0 563 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 TREX1Q9NSU2 369 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 RBFOX1Q9NWB1 397 aaKnown RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 IKZF2Q9UKS7 526 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 VIPR1P32241 457 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 SPAM1P38567 509 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 GZMKP49863 264 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 CTBP2P56545 445 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 DUSP4Q13115 394 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 NOGQ13253 232 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 CHRNA6Q15825 494 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 PRSS36Q5K4E3 855 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 MED27Q6P2C8 311 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 LINC00299Q6ZSB3 139 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 SSX6Q7RTT6 188 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 RNF175Q8N4F7 328 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF615Q8N8J6 731 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ALOXE3Q9BYJ1 711 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 MTG2Q9H4K7 406 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 FAM124BQ9H5Z6 455 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ERVMER34-1Q9H9K5 563 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 KIAA1522Q9P206 1035 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-201ENST00000337299 ASF1AQ9Y294 204 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
COL2A1-201ENST00000337299 A0A1B0GTL3 188 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 TCRBV5S2A0A599 114 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 LRRN3E7EW58 273 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 ARNTLO00327 626 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 PDCD5O14737 125 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 GJB3O75712 270 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF432O94892 652 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 HLA-DQA2P01906 255 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 KLK1P06870 262 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 BMPR1AP36894 532 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 ETV3P41162 512 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 CCR4P51679 360 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 BCL2A1Q16548 175 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 TMEM207Q6UWW9 146 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms