RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CRISP1P54107 249 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ILKQ13418 452 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 DGCR6Q14129 220 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ZNF404Q494X3 552 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 PIP5KL1Q5T9C9 394 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 MEDAGQ5VYS4 303 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 EGFLAMQ63HQ2 1017 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 FRMPD2BQ6IN97 320 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 KIAA1161Q6NSJ0 714 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 CEACAM20Q6UY09 585 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ADGRF3Q8IZF5 1079 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 RAB42Q8N4Z0 105 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 AMER2Q8N7J2 671 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ZNF740Q8NDX6 193 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 OR5AR1Q8NGP9 310 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ZNF675Q8TD23 568 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ING5Q8WYH8 240 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 UBE2FQ969M7 185 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 RGMAQ96B86 450 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TEFMQ96QE5 360 aaKnown RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 RAB11FIP5Q9BXF6 653 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TEX101Q9BY14 249 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 DSN1Q9H410 356 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 DDX31Q9H8H2 851 aaKnown RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SIAEQ9HAT2 523 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SIRT3Q9NTG7 399 aaPredicted RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 THAP10Q9P2Z0 257 aaPredicted RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 MKLN1Q9UL63 735 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 A0A1W2PPV9 198 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 HEPACAM2A8MVW5 462 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 NDUFS4O43181 175 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TLL1O43897 1013 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 MAN1A2O60476 641 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 GBAP04062 536 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 IMPDH2P12268 514 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TGM1P22735 817 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 CHMP24386 653 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ETV6P41212 452 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 P2RY2P41231 377 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 OR1E2P47887 323 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 KCNJ5P48544 419 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 CLK1P49759 484 aaKnown RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 CDK3Q00526 305 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 MEF2AQ02078 507 aaPredicted RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ALDH6A1Q02252 535 aaKnown RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TSTA3Q13630 321 aaPredicted RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ATP1A4Q13733 1029 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 PTGES3Q15185 160 aaKnown RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 INAQ16352 499 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 NDUFA9Q16795 377 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TMEM35AQ53FP2 167 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 PRAMEF8Q5VWM4 474 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 PRAMEF7Q5VXH5 474 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SLX4IPQ5VYV7 408 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 PPP2R2DQ66LE6 453 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 KLHL17Q6TDP4 642 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 CD300LDQ6UXZ3 194 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TMEM64Q6YI46 380 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 EGFL6Q8IUX8 553 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ANKRD53Q8N9V6 530 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 AQP11Q8NBQ7 271 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 FAM46DQ8NEK8 389 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 OR5AK3PQ8NH89 298 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 MCFD2Q8NI22 146 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SFXN5Q8TD22 340 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SLC38A5Q8WUX1 472 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 HERVK_113Q902F9 699 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SUSD6Q92537 303 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 NR4A3Q92570 626 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SMARCD2Q92925 531 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 Q96MT0 163 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ASB16Q96NS5 453 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 ZNF607Q96SK3 696 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 FUZQ9BT04 418 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SARGQ9BW04 601 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 SP140LQ9H930 580 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 PRM3Q9NNZ6 103 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 CHCHD3Q9NX63 227 aaKnown RBP10.22□□□□□ -0.77
CCDC172-201ENST00000333254 TAC3Q9UHF0 121 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 DAPK2Q9UIK4 370 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 RAB23Q9ULC3 237 aa10.22□□□□□ -0.77
CCDC172-201ENST00000333254 MN1Q10571 1320 aaPredicted RBP10.21□□□□□ -0.77
CCDC172-201ENST00000333254 LINC01553A4QN01 128 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 SAP18O00422 153 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 PCDH17O14917 1159 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 CNOT3O75175 753 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 OSMP13725 252 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 TNFRSF1BP20333 461 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 ENDOUP21128 410 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 C21orf33P30042 268 aaPredicted RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 SLC6A11P48066 632 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 IDH2P48735 452 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 ANXA11P50995 505 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 MANFP55145 182 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 RPS3AP61247 264 aaKnown RBP10.21□□□□□ -0.78
CCDC172-201ENST00000333254 RHAGQ02094 409 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 PRKCDQ05655 676 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 FPGSQ05932 587 aa10.21□□□□□ -0.78
CCDC172-201ENST00000333254 ST3GAL4Q11206 333 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms