RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TEFMQ96QE5 360 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 DUSP21Q9H596 190 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 SLC28A3Q9HAS3 691 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 SCN3BQ9NY72 215 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 WARS2Q9UGM6 360 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 PCDHGB1Q9Y5G3 927 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 MYO9BQ13459 2157 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3DA0A087WVF3 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3IA0A087WXS9 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3EA0A087X179 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3KA0A087X1G2 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TRBC2A0A5B9 178 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 LRIT2A6NDA9 550 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3FA6NER0 549 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3LB9A6J9 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SCAMP1O15126 338 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 PPM1DO15297 605 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 KCNJ13O60928 360 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SERPINB7O75635 380 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 DNAJB5O75953 348 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3HP0C7X1 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 EMX1Q04741 257 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 UAP1L1Q3KQV9 507 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3CQ6IPX1 549 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SDE2Q6IQ49 451 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TNFAIP8L2Q6P589 184 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 NCCRP1Q6ZVX7 275 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 SLC5A8Q8N695 610 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 TTLQ8NG68 377 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 ZBED6CLQ96FA7 236 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 PLEKHA8Q96JA3 519 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 HRASLS5Q96KN8 279 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 C17orf62Q9BQA9 187 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 AICDAQ9GZX7 198 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 MVB12BQ9H7P6 319 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 PRDM8Q9NQV8 689 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SIRT3Q9NTG7 399 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 ERVK-18Q9QC07 812 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 A0A0A6YYD5 115 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 J3KTA2 159 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 CACNB4O00305 520 aaPredicted RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 SLC31A1O15431 190 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 ADAM23O75077 832 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 INMTO95050 263 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 CD247P20963 164 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SSR2P43308 183 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 XCR1P46094 333 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 NFATC3Q12968 1075 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 NPTX1Q15818 432 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SMN1Q16637 294 aaKnown RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 EXOC3L2Q2M3D2 409 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 PROX2Q3B8N5 592 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 DCDC5Q6ZRR9 648 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 IL17RCQ8NAC3 791 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SLC38A5Q8WUX1 472 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 UBE2FQ969M7 185 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 KCNC2Q96PR1 638 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 MRPS30Q9NP92 439 aaKnown RBP16.53■□□□□ 0.24
DDX28-201ENST00000332395 A4GALTQ9NPC4 353 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 RASSF1Q9NS23 344 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 SNX11Q9Y5W9 270 aa16.53■□□□□ 0.24
DDX28-201ENST00000332395 A0A1W2PQF6 199 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 FUOMA2VDF0 154 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 PCDHGA12O60330 932 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 BCHEP06276 602 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 COL9A1P20849 921 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 BCL6P41182 706 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 PSMD7P51665 324 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 GP2P55259 537 aaKnown RBP16.52■□□□□ 0.24
DDX28-201ENST00000332395 C21orf59P57076 290 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 MICAQ29983 383 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 SPDYE7PQ495Y7 208 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 C6orf120Q7Z4R8 191 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 LGI4Q8N135 537 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 FAR1Q8WVX9 515 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 UCN3Q969E3 161 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 PIP5K1AQ99755 562 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 FUNDC2Q9BWH2 189 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 S1PR5Q9H228 398 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 GPN2Q9H9Y4 310 aaPredicted RBP16.52■□□□□ 0.24
DDX28-201ENST00000332395 FGF22Q9HCT0 170 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 RLIMQ9NVW2 624 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 PCDHGA6Q9Y5G7 932 aa16.52■□□□□ 0.24
DDX28-201ENST00000332395 ZNF99A8MXY4 864 aaPredicted RBP16.51■□□□□ 0.23
DDX28-201ENST00000332395 C5orf58C9J3I9 102 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 B4GALT2O60909 372 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 STATHP02808 62 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 OCM2P0CE71 109 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 OCMP0CE72 109 aaPredicted RBP16.51■□□□□ 0.23
DDX28-201ENST00000332395 ANXA8P13928 327 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 HOXB2P14652 356 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 GRK3P35626 688 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 KRT20P35900 424 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 PPP2CBP62714 309 aa16.51■□□□□ 0.23
DDX28-201ENST00000332395 TRA2BP62995 288 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms